Pallister-Hall syndrome

General Information (adopted from Orphanet):

Synonyms, Signs: HYPOTHALAMIC HAMARTOBLASTOMA, HYPOPITUITARISM, IMPERFORATE ANUS, AND POSTAXIAL POLYDACTYLY
PHS
Hypothalamic hamartoblastoma syndrome
Number of Symptoms 85
OrphanetNr: 672
OMIM Id: 146510
ICD-10: D33.0
UMLs: C0265220
MeSH: D054975
MedDRA:
Snomed: 56677004

Prevalence, inheritance and age of onset:

Prevalence: 100 cases [Orphanet]
Inheritance: Autosomal dominant
Not applicable
[Orphanet]
Age of onset: Neonatal
Infancy
[Orphanet]

Disease classification (adopted from Orphanet):

Parent Diseases: Disease associated with nonacquired combined pituitary hormone deficiency
 -Rare endocrine disease
 -Rare genetic disease
Genetic multiple congenital anomalies/dysmorphic syndrome - variable intellectual deficit
 -Rare genetic disease
Multiple congenital anomalies/dysmorphic syndrome - variable intellectual deficit
 -Rare developmental defect during embryogenesis
Syndrome with limb duplication, polydactyly, syndactyly, and/or hyperphalangy
 -Rare bone disease
 -Rare developmental defect during embryogenesis
Syndromic anorectal malformation
 -Rare abdominal surgical disease
 -Rare developmental defect during embryogenesis
 -Rare genetic disease
Syndromic renal or urinary tract malformation
 -Rare developmental defect during embryogenesis
 -Rare genetic disease
 -Rare renal disease

Symptom Information: Sort by abundance 

1
(HPO:0000568) Microphthalmia 183 / 7739
2
(HPO:0002101) Abnormal lung lobation Frequent [Orphanet] 33 / 7739
3
(HPO:0005349) Hypoplasia of the epiglottis 15782417 IBIS 7 / 7739
4
(HPO:0010564) Bifid epiglottis 15782417 IBIS 2 / 7739
5
(HPO:0008751) Laryngeal cleft 5 / 7739
6
(HPO:0002575) Tracheoesophageal fistula Frequent [Orphanet] 54 / 7739
7
(HPO:0004322) Short stature 1232 / 7739
8
(HPO:0001629) Ventricular septal defect Occasional [Orphanet] 316 / 7739
9
(HPO:0001654) Abnormality of the heart valves Occasional [Orphanet] 49 / 7739
10
(HPO:0005151) Preductal coarctation of the aorta 1 / 7739
11
(HPO:0001643) Patent ductus arteriosus Occasional [Orphanet] 228 / 7739
12
(HPO:0000824) Growth hormone deficiency 56 / 7739
13
(HPO:0008207) Primary adrenal insufficiency Frequent [Orphanet] 26 / 7739
14
(HPO:0008220) Hypocortisolemia 6 / 7739
15
(HPO:0002251) Aganglionic megacolon Occasional [Orphanet] 78 / 7739
16
(HPO:0002444) Hypothalamic hamartoma 5 / 7739
17
(HPO:0000708) Behavioral abnormality Occasional [Orphanet] 212 / 7739
18
(HPO:0001250) Seizures Occasional [Orphanet] 1245 / 7739
19
(HPO:0001511) Intrauterine growth retardation Very frequent [Orphanet] 358 / 7739
20
(HPO:0006159) Mesoaxial hand polydactyly 5 / 7739
21
(HPO:0001162) Postaxial hand polydactyly Very frequent [Orphanet] 119 / 7739
22
(HPO:0001830) Postaxial foot polydactyly Occasional [Orphanet] 37 / 7739
23
(HPO:0010112) Mesoaxial foot polydactyly 1 / 7739
24
(HPO:0001770) Toe syndactyly Occasional [Orphanet] 149 / 7739
25
(HPO:0012165) Oligodactyly 18 / 7739
26
(HPO:0100259) Postaxial polydactyly 85 / 7739
27
(HPO:0001159) Syndactyly 140 / 7739
28
(HPO:0006101) Finger syndactyly Frequent [Orphanet] 198 / 7739
29
(HPO:0002827) Hip dislocation 94 / 7739
30
(HPO:0006042) Y-shaped metacarpals 3 / 7739
31
(HPO:0010044) Short 4th metacarpal 14 / 7739
32
(HPO:0004279) Short palm Occasional [Orphanet] 323 / 7739
33
(HPO:0003048) Radial head subluxation 6 / 7739
34
(HPO:0006402) Distal shortening of limbs 2 / 7739
35
(HPO:0003027) Mesomelia Frequent [Orphanet] 58 / 7739
36
(HPO:0000277) Abnormality of the mandible Frequent [Orphanet] 394 / 7739
37
(HPO:0000902) Rib fusion 19 / 7739
38
(HPO:0003312) Abnormal form of the vertebral bodies Occasional [Orphanet] 172 / 7739
39
(HPO:0002937) Hemivertebrae 41 / 7739
40
(HPO:0007370) Aplasia/Hypoplasia of the corpus callosum Occasional [Orphanet] 180 / 7739
41
(HPO:0001805) Thick nail Very frequent [Orphanet] 96 / 7739
42
(HPO:0002164) Nail dysplasia 82 / 7739
43
(HPO:0002023) Anal atresia Frequent [Orphanet] 135 / 7739
44
(HPO:0000835) Adrenal hypoplasia 23 / 7739
45
(HPO:0000826) Precocious puberty Occasional [Orphanet] 42 / 7739
46
(HPO:0000054) Micropenis Frequent [Orphanet] 257 / 7739
47
(HPO:0008706) Distal urethral duplication 2 / 7739
48
(HPO:0000028) Cryptorchidism 347 / 7739
49
(HPO:0008734) Decreased testicular size 105 / 7739
50
(HPO:0000035) Abnormality of the testis Frequent [Orphanet] 296 / 7739
51
(HPO:0007601) Midline facial capillary hemangioma 1 / 7739
52
(HPO:0010285) Oral synechia Occasional [Orphanet] 31 / 7739
53
(HPO:0000174) Abnormality of the palate Frequent [Orphanet] 298 / 7739
54
(HPO:0000695) Natal tooth 42 / 7739
55
(HPO:0000171) Microglossia Frequent [Orphanet] 27 / 7739
56
(HPO:0000204) Cleft upper lip 193 / 7739
57
(HPO:0000202) Oral cleft 120 / 7739
58
(HPO:0000463) Anteverted nares 305 / 7739
59
(HPO:0005280) Depressed nasal bridge Frequent [Orphanet] 381 / 7739
60
(HPO:0003196) Short nose Frequent [Orphanet] 264 / 7739
61
(HPO:0000864) Abnormality of the hypothalamus-pituitary axis Very frequent [Orphanet] 23 / 7739
62
(HPO:0000871) Panhypopituitarism 8 / 7739
63
(HPO:0000357) Abnormal location of ears Frequent [Orphanet] 328 / 7739
64
(HPO:0000413) Atresia of the external auditory canal 32 / 7739
65
(HPO:0008551) Microtia 98 / 7739
66
(HPO:0000358) Posteriorly rotated ears 163 / 7739
67
(HPO:0000820) Abnormality of the thyroid gland Occasional [Orphanet] 19 / 7739
68
(HPO:0008188) Thyroid dysgenesis 1 / 7739
69
(HPO:0000086) Ectopic kidney 29 / 7739
70
(HPO:0000107) Renal cyst Frequent [Orphanet] 126 / 7739
71
(HPO:0000110) Renal dysplasia 44 / 7739
72
(HPO:0008678) Renal hypoplasia/aplasia Occasional [Orphanet] 127 / 7739
73
(HPO:0000089) Renal hypoplasia 78 / 7739
74
(HPO:0000006) Autosomal dominant inheritance 2518 / 7739
75
(HPO:0011420) Death Occasional [Orphanet] 184 / 7739
76
(HPO:0001360) Holoprosencephaly 29 / 7739
77
(HPO:0040075) Hypopituitarism Frequent [Orphanet] 32 / 7739
78
(HPO:0003811) Neonatal death 44 / 7739
79
(HPO:0012758) Neurodevelopmental delay Occasional [Orphanet] 949 / 7739
80
(OMIM) Bifid or hypoplastic epiglottis 1 / 7739
81
(OMIM) Hypothalamic hamartoblastoma 1 / 7739
82
(OMIM) Multiple buccal frenula 1 / 7739
83
(OMIM) Pituitary aplasia or dysplasia 1 / 7739
84
(OMIM) Simple auricles 2 / 7739
85
(OMIM) Thyroid dysplasia/aplasia 1 / 7739

Associated genes:

ClinVar (via SNiPA)

Gene symbol Variation Clinical significance Reference

Additional Information:

Description: (OMIM) Pallister-Hall syndrome is a pleiotropic autosomal dominant disorder comprising hypothalamic hamartoma, pituitary dysfunction, central polydactyly, and visceral malformations (Biesecker et al., 1996).
Diagnosis OMIM Iafolla et al. (1989) pointed out that magnetic resonance imaging is the most valuable diagnostic tool; CT scan has been reported to miss the tumor.

An international workshop on Pallister-Hall syndrome (Biesecker et al., 1996) developed ...

Clinical Description OMIM Hall et al. (1980) reported 6 infants with a neonatally lethal malformation syndrome of hypothalamic hamartoblastoma, postaxial polydactyly, and imperforate anus. Some had laryngeal cleft, abnormal lung lobation, renal agenesis or dysplasia, short fourth metacarpals, nail dysplasia, multiple ...
Genotype-Phenotype Correlations OMIM Johnston et al. (2005) hypothesized that GLI3 mutations that predict a truncated functional repressor protein cause Pallister-Hall syndrome, whereas haploinsufficiency of GLI3 cause Greig cephalopolysyndactyly syndrome (GCPS; 175700). To test this hypothesis, they screened 46 patients with PHS ...
Molecular genetics OMIM Because of the colocalization of the loci for PHS and GCPS, Kang et al. (1997) investigated GLI3 as a candidate gene for PHS. They reported 2 PHS families with frameshift mutations in GLI3 (165240.0002; 165240.0003) located 3-prime of ...
Diagnosis GeneReviews Pallister-Hall syndrome (PHS) can be diagnosed based on clinical findings in individuals with classic signs. Molecular genetic testing may be useful to confirm the diagnosis in these individuals and is used to establish the diagnosis in individuals in whom the clinical findings are ambiguous or mild. ...
Clinical Description GeneReviews Pallister-Hall syndrome (PHS) displays a wide range of severity. The literature frequently reflects the assumption that PHS is severe and Greig cephalopolysyndactyly syndrome is mild. This is clearly incorrect, as a minority of individuals with PHS show multiple severe anomalies and most individuals with PHS are mildly affected with polydactyly, asymptomatic bifid epiglottis, and hypothalamic hamartoma. Without careful clinical evaluation, these individuals may be incorrectly diagnosed with PAP-A. ...
Genotype-Phenotype Correlations GeneReviews Genotype-phenotype correlations of GLI3 mutations ...
Differential Diagnosis GeneReviews Central polydactyly ...
Management GeneReviews To establish the extent of disease in an individual diagnosed with Pallister-Hall syndrome (PHS), the following evaluations are recommended:...
Molecular genetics GeneReviews Information in the Molecular Genetics and OMIM tables may differ from that elsewhere in the GeneReview: tables may contain more recent information. —ED....