Coffin-Lowry syndrome

General Information (adopted from Orphanet):

Synonyms, Signs: CLS
Number of Symptoms 120
OrphanetNr: 192
OMIM Id: 303600
ICD-10: Q87.0
UMLs: C0265252
MeSH: D038921
MedDRA:
Snomed: 15182000

Prevalence, inheritance and age of onset:

Prevalence: 1.5 of 100 000 [Orphanet]
Inheritance: X-linked dominant
[Orphanet]
Age of onset: Neonatal
[Orphanet]

Disease classification (adopted from Orphanet):

Parent Diseases: Syndromic obesity
 -Rare developmental defect during embryogenesis
 -Rare endocrine disease
 -Rare genetic disease
X-linked syndromic intellectual deficit
 -Rare genetic disease
 -Rare neurologic disease

Symptom Information: Sort by abundance 

1
(HPO:0000316) Hypertelorism Very frequent [Orphanet] 644 / 7739
2
(HPO:0000518) Cataract Occasional [Orphanet] 454 / 7739
3
(HPO:0000510) Rod-cone dystrophy Occasional [Orphanet] 266 / 7739
4
(HPO:0000498) Blepharitis Occasional [Orphanet] 27 / 7739
5
(HPO:0004322) Short stature Very frequent [Orphanet] 1232 / 7739
6
(HPO:0004325) Decreased body weight 492 / 7739
7
(HPO:0001633) Abnormality of the mitral valve Occasional [Orphanet] 69 / 7739
8
(HPO:0001653) Mitral regurgitation 64 / 7739
9
(HPO:0001702) Abnormality of the tricuspid valve Occasional [Orphanet] 32 / 7739
10
(HPO:0001646) Abnormality of the aortic valve Occasional [Orphanet] 55 / 7739
11
(HPO:0002119) Ventriculomegaly Frequent [Orphanet] 253 / 7739
12
(HPO:0003202) Skeletal muscle atrophy Occasional [Orphanet] 281 / 7739
13
(HPO:0001252) Muscular hypotonia Occasional [Orphanet] 990 / 7739
14
(HPO:0008947) Infantile muscular hypotonia 482 / 7739
15
(HPO:0010547) Muscle flaccidity 466 / 7739
16
(HPO:0001324) Muscle weakness Occasional [Orphanet] 859 / 7739
17
(HPO:0001276) Hypertonia Frequent [Orphanet] 317 / 7739
18
(HPO:0001249) Intellectual disability 1089 / 7739
19
(HPO:0100716) Self-injurious behavior Occasional [Orphanet] 43 / 7739
20
(HPO:0002167) Neurological speech impairment Very frequent [Orphanet] 308 / 7739
21
(HPO:0001288) Gait disturbance Frequent [Orphanet] 318 / 7739
22
(HPO:0002015) Dysphagia Frequent [Orphanet] 301 / 7739
23
(HPO:0001250) Seizures Occasional [Orphanet] 1245 / 7739
24
(HPO:0009882) Short distal phalanx of finger Frequent [Orphanet] 125 / 7739
25
(HPO:0006129) Drumstick terminal phalanges 1 / 7739
26
(HPO:0001500) Broad finger Very frequent [Orphanet] 9 / 7739
27
(HPO:0001187) Hyperextensibility of the finger joints 12 / 7739
28
(HPO:0001182) Tapered finger Very frequent [Orphanet] 93 / 7739
29
(HPO:0002673) Coxa valga 57 / 7739
30
(HPO:0001763) Pes planus Frequent [Orphanet] 176 / 7739
31
(HPO:0011867) Abnormality of the wing of the ilium Frequent [Orphanet] 123 / 7739
32
(HPO:0002868) Narrow iliac wings 15 / 7739
33
(HPO:0001163) Abnormality of the metacarpal bones Frequent [Orphanet] 149 / 7739
34
(HPO:0001169) Broad palm 43 / 7739
35
(HPO:0001176) Large hands Very frequent [Orphanet] 43 / 7739
36
(HPO:0010049) Short metacarpal 99 / 7739
37
(HPO:0004279) Short palm Very frequent [Orphanet] 323 / 7739
38
(HPO:0000954) Single transverse palmar crease 162 / 7739
39
(HPO:0000303) Mandibular prognathia 179 / 7739
40
(HPO:0000327) Hypoplasia of the maxilla Frequent [Orphanet] 129 / 7739
41
(HPO:0004437) Cranial hyperostosis Very frequent [Orphanet] 55 / 7739
42
(HPO:0001476) Delayed closure of the anterior fontanelle 23 / 7739
43
(HPO:0002007) Frontal bossing Very frequent [Orphanet] 366 / 7739
44
(HPO:0000252) Microcephaly Frequent [Orphanet] 832 / 7739
45
(HPO:0002684) Thickened calvaria 32 / 7739
46
(HPO:0010309) Bifid sternum 1 / 7739
47
(HPO:0000768) Pectus carinatum Very frequent [Orphanet] 136 / 7739
48
(HPO:0000767) Pectus excavatum Very frequent [Orphanet] 244 / 7739
49
(HPO:0003312) Abnormal form of the vertebral bodies Very frequent [Orphanet] 172 / 7739
50
(HPO:0008454) Lumbar kyphosis 3 / 7739
51
(HPO:0002808) Kyphosis Very frequent [Orphanet] 289 / 7739
52
(HPO:0002650) Scoliosis Very frequent [Orphanet] 705 / 7739
53
(HPO:0007370) Aplasia/Hypoplasia of the corpus callosum Occasional [Orphanet] 180 / 7739
54
(HPO:0001382) Joint hypermobility Very frequent [Orphanet] 231 / 7739
55
(HPO:0000940) Abnormal diaphysis morphology Very frequent [Orphanet] 41 / 7739
56
(HPO:0002750) Delayed skeletal maturation Very frequent [Orphanet] 250 / 7739
57
(HPO:0002208) Coarse hair 58 / 7739
58
(HPO:0002553) Highly arched eyebrow 92 / 7739
59
(HPO:0000574) Thick eyebrow 96 / 7739
60
(HPO:0001812) Hyperconvex fingernails 3 / 7739
61
(HPO:0001804) Hypoplastic fingernail Frequent [Orphanet] 62 / 7739
62
(HPO:0002035) Rectal prolapse 11 / 7739
63
(HPO:0000023) Inguinal hernia 181 / 7739
64
(HPO:0000139) Uterine prolapse 6 / 7739
65
(HPO:0000280) Coarse facial features Very frequent [Orphanet] 189 / 7739
66
(HPO:0000689) Dental malocclusion 114 / 7739
67
(HPO:0000494) Downslanted palpebral fissures Very frequent [Orphanet] 328 / 7739
68
(HPO:0000336) Prominent supraorbital ridges 45 / 7739
69
(HPO:0000159) Abnormality of the lip Very frequent [Orphanet] 33 / 7739
70
(HPO:0012471) Thick vermilion border Very frequent [Orphanet] 115 / 7739
71
(HPO:0000218) High palate 356 / 7739
72
(HPO:0002705) High, narrow palate Frequent [Orphanet] 308 / 7739
73
(HPO:0000189) Narrow palate 45 / 7739
74
(HPO:0000164) Abnormality of the teeth Very frequent [Orphanet] 291 / 7739
75
(HPO:0009804) Reduced number of teeth Very frequent [Orphanet] 137 / 7739
76
(HPO:0006482) Abnormality of dental morphology Very frequent [Orphanet] 81 / 7739
77
(HPO:0000684) Delayed eruption of teeth Occasional [Orphanet] 117 / 7739
78
(HPO:0000668) Hypodontia 81 / 7739
79
(HPO:0000687) Widely spaced teeth 40 / 7739
80
(HPO:0000695) Natal tooth Occasional [Orphanet] 42 / 7739
81
(HPO:0000232) Everted lower lip vermilion Very frequent [Orphanet] 90 / 7739
82
(HPO:0000194) Open mouth Very frequent [Orphanet] 70 / 7739
83
(HPO:0000154) Wide mouth Frequent [Orphanet] 137 / 7739
84
(HPO:0009746) Thick nasal septum 1 / 7739
85
(HPO:0000463) Anteverted nares Very frequent [Orphanet] 305 / 7739
86
(HPO:0005280) Depressed nasal bridge Very frequent [Orphanet] 381 / 7739
87
(HPO:0009928) Thick nasal alae Very frequent [Orphanet] 21 / 7739
88
(HPO:0000445) Wide nose Frequent [Orphanet] 190 / 7739
89
(HPO:0000286) Epicanthus Very frequent [Orphanet] 371 / 7739
90
(HPO:0000506) Telecanthus 156 / 7739
91
(HPO:0000407) Sensorineural hearing impairment Occasional [Orphanet] 524 / 7739
92
(HPO:0008527) Congenital sensorineural hearing impairment 165 / 7739
93
(HPO:0008625) Severe sensorineural hearing impairment 150 / 7739
94
(HPO:0000411) Protruding ear Frequent [Orphanet] 140 / 7739
95
(HPO:0002104) Apnea Occasional [Orphanet] 106 / 7739
96
(HPO:0000973) Cutis laxa 43 / 7739
97
(HPO:0000965) Cutis marmorata 46 / 7739
98
(HPO:0001582) Redundant skin Frequent [Orphanet] 51 / 7739
99
(HPO:0002536) Abnormal cortical gyration Occasional [Orphanet] 72 / 7739
100
(HPO:0002334) Abnormality of the cerebellar vermis Occasional [Orphanet] 137 / 7739
101
(HPO:0012795) Abnormality of the optic disc Occasional [Orphanet] 187 / 7739
102
(HPO:0002120) Cerebral cortical atrophy Occasional [Orphanet] 187 / 7739
103
(HPO:0100613) Death in early adulthood Occasional [Orphanet] 10 / 7739
104
(HPO:0012758) Neurodevelopmental delay Very frequent [Orphanet] 949 / 7739
105
(HPO:0001423) X-linked dominant inheritance 69 / 7739
106
(OMIM) Birth length normal 15 / 7739
107
(OMIM) Birth weight normal 14 / 7739
108
(OMIM) Dependent acrocyanosis 1 / 7739
109
(OMIM) Forearm fullness 1 / 7739
110
(OMIM) Hypoplastic mastoids 1 / 7739
111
(OMIM) Hypoplastic sinuses 1 / 7739
112
(OMIM) Large medial incisors 1 / 7739
113
(OMIM) Large, open mouth 1 / 7739
114
(OMIM) Large, soft hands 1 / 7739
115
(OMIM) Prominent brow 2 / 7739
116
(OMIM) Short bifid sternum 1 / 7739
117
(OMIM) Small fingernails 1 / 7739
118
(OMIM) Straight, coarse hair 1 / 7739
119
(OMIM) Thick alae nasi 2 / 7739
120
(OMIM) Thick everted lower lip (deletion patients) 4 / 7739

Associated genes:

ClinVar (via SNiPA)

Gene symbol Variation Clinical significance Reference

Additional Information:

Description: (OMIM) Coffin-Lowry syndrome is a rare form of X-linked mental retardation characterized by skeletal malformations, growth retardation, hearing deficit, paroxysmal movement disorders, and cognitive impairment in affected males and some carrier females (Kesler et al., 2007).

Hendrich ...

Diagnosis OMIM Merienne et al. (1998) evaluated both immunoblot and RSK2 kinase assays as diagnostic tests for Coffin-Lowry syndrome using cultured lymphoblastoid or fibroblast cell lines. Western blot analysis failed to detect RSK2 protein in 6 patients, suggesting the presence ...
Clinical Description OMIM As described by Coffin et al. (1966) in 2 unrelated adolescent boys, the features of CLS are mental retardation with peculiar pugilistic nose, large ears, tapered fingers, drumstick terminal phalanges by x-ray, and pectus carinatum. The occurrence of ...
Genotype-Phenotype Correlations OMIM The level of residual RPS6KA3 activity seems to be related to the severity of the phenotype. Merienne et al. (1999) demonstrated 10 to 20% residual enzymatic activity in patients with nonsyndromic X-linked mental retardation (MRX19; 300844), which was ...
Molecular genetics OMIM Trivier et al. (1996) demonstrated deletion, nonsense, and missense mutations of the RSK2 gene in patients with CLS. The gene is located within an interval of approximately 3 cM, between DXS365 and DXS7161, on Xp22.3 where the CLS ...
Population genetics OMIM The estimated incidence of Coffin-Lowry syndrome is 1 in 50,000 to 1 in 100,000, and about 70 to 80% of patients are sporadic cases (Marques-Pereira et al., 2010).
Diagnosis GeneReviews Clinical findings. The most important clinical signs of Coffin-Lowry syndrome (CLS) in affected males are the following [Hanauer & Young 2002] (see Figures 1, 2, 3, 4, 5):...
Clinical Description GeneReviews Development. Coffin-Lowry syndrome (CLS) is characterized by severe-to- profound intellectual disability in males; intellect ranges from normal to profoundly retarded in heterozygous females. Early developmental assessments may overestimate the ultimate developmental prognosis [Hunter 2002]. Touraine et al [2002] did not provide detail but stated “our data have shown that intellectual disability is only moderate in most patients as soon as proper care is provided”; and the families reported by Field et al [2006] showed variable and mild physical signs and included members with only mild retardation. The authors are aware of a patient with a proven RPS6KA3 mutation who works in a fast food restaurant [C Skinner, personal communication]....
Genotype-Phenotype Correlations GeneReviews Although no strong correlation exists between phenotype and location or type of RPS6KA3 mutation, individuals with certain missense mutations may tend to have milder disease expression [Delaunoy et al 2001]. The family classified as having a form of nonsyndromic intellectual disability (MRX19; see Genetically Related Disorders) had a missense mutation in RPS6KA3, which caused an 80% reduction in ribosomal S6 kinase enzyme activity, in contrast to most mutations in individuals with CLS that cause a total loss of ribosomal S6 kinase enzyme activity [Merienne et al 1999]. This finding indicates that some RPS6KA3 mutations probably give rise to non-CLS phenotypes or nonsyndromic X-linked intellectual disability....
Differential Diagnosis GeneReviews The diagnosis of Coffin-Lowry syndrome (CLS) in the older male child or adult usually does not present a problem. The findings in a young child or more mildly affected female may overlap with other syndromes. Similarly, older female children and adults, even when they are the proband, can be diagnosed readily when they fully express the syndrome....
Management GeneReviews To establish the extent of disease in an individual diagnosed with Coffin-Lowry syndrome (CLS), the following evaluations are recommended:...
Molecular genetics GeneReviews Information in the Molecular Genetics and OMIM tables may differ from that elsewhere in the GeneReview: tables may contain more recent information. —ED....