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Arabidopsis thaliana project



Element Report

Name: AT5G40610.1Version: 10
Element type:transcript
Description:NAD-dependent glycerol-3-phosphate dehydrogenase family protein
Comment:NAD-dependent glycerol-3-phosphate dehydrogenase family protein; FUNCTIONS IN: in 9 functions; INVOLVED IN: oxidation reduction, glycerol-3-phosphate metabolic process, glycerol-3-phosphate catabolic process, carbohydrate metabolic process, metabolic process; LOCATED IN: chloroplast, glycerol-3-phosphate dehydrogenase complex, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (InterPro:IPR011128), NAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR006168), NAD-dependent glycerol-3-phosphate dehydrogenase, eukaryotic (InterPro:IPR017751), NAD(P)-binding domain (InterPro:IPR016040), NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal (InterPro:IPR006109); BEST Arabidopsis thaliana protein match is: NAD-dependent glycerol-3-phosphate dehydrogenase family protein (TAIR:AT2G40690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Contig:chr5_pseudomolecule_TAIR9

Gene features
Size (bp):2494
Spliced size (bp):1509
Start:16267354
Stop:16264861
Subelements:
TypeStartStopSize
5'UTR19696
exon1349349
exon59366977
exon75582773
exon9031120218
exon12001307108
exon14111512102
exon16051725121
exon1818187255
exon1955200349
exon21382494357
3'UTR22852494210
Related elements:Group List
Evidences:Evidence List

References
Confidence:TAIR ath release 10.0
Publications:PubMed
External links:TIGR TAIR
References:GO database
GO database
GO database
GO database
GO database
GO database
GO database
GO database
GO database
GO database
GO database
GO database
GO database
GO database
GO database
GO database
GO database

Gene family information
Show orthologous gene family: Gene family

Sequence report for AT5G40610.1
View sequence: CDS
spliced
unspliced
Protein

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Protein domain informations from SIMAP
Simap homologs in:-Viridiplantae
-Fungi
-Mammalia
Simap features:List protein features and domains in this gene

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