Arabidopsis thaliana project

Element Report

Name: AT5G40610.1	Version: 10

Element type:	transcript
Description:	NAD-dependent glycerol-3-phosphate dehydrogenase family protein
Comment:	NAD-dependent glycerol-3-phosphate dehydrogenase family protein; FUNCTIONS IN: in 9 functions; INVOLVED IN: oxidation reduction, glycerol-3-phosphate metabolic process, glycerol-3-phosphate catabolic process, carbohydrate metabolic process, metabolic process; LOCATED IN: chloroplast, glycerol-3-phosphate dehydrogenase complex, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (InterPro:IPR011128), NAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR006168), NAD-dependent glycerol-3-phosphate dehydrogenase, eukaryotic (InterPro:IPR017751), NAD(P)-binding domain (InterPro:IPR016040), NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal (InterPro:IPR006109); BEST Arabidopsis thaliana protein match is: NAD-dependent glycerol-3-phosphate dehydrogenase family protein (TAIR:AT2G40690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Contig:	chr5_pseudomolecule_TAIR9

Gene features

Size (bp):

2494

Spliced size (bp):

1509

Start:

16267354

Stop:

16264861

Subelements:

Type	Start	Stop	Size
5'UTR	1	96	96
exon	1	349	349
exon	593	669	77
exon	755	827	73
exon	903	1120	218
exon	1200	1307	108
exon	1411	1512	102
exon	1605	1725	121
exon	1818	1872	55
exon	1955	2003	49
exon	2138	2494	357
3'UTR	2285	2494	210

Related elements:

Evidences:

References

Confidence:	TAIR ath release 10.0
Publications:	PubMed
External links:	TIGR TAIR
References:	GO database GO database GO database GO database GO database GO database GO database GO database GO database GO database GO database GO database GO database GO database GO database GO database GO database

Gene family information

Show orthologous gene family:

Sequence report for AT5G40610.1

View sequence:	CDS
	spliced
	unspliced
	Protein

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Protein domain informations from SIMAP

Simap homologs in:	-Viridiplantae
	-Fungi
	-Mammalia
Simap features:	List protein features and domains in this gene

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