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Arabidopsis thaliana project



Element Report

Name: AT4G02930.1Version: 10
Element type:transcript
Description:GTP binding Elongation factor Tu family protein
Comment:GTP binding Elongation factor Tu family protein; FUNCTIONS IN: translation elongation factor activity, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1B (TAIR:AT4G20360.1); Has 89361 Blast hits to 89296 proteins in 17600 species: Archae - 1195; Bacteria - 40691; Metazoa - 19476; Fungi - 9897; Plants - 2075; Viruses - 6; Other Eukaryotes - 16021 (source: NCBI BLink).
Contig:chr4_pseudomolecule_TAIR9

Gene features
Size (bp):2996
Spliced size (bp):1757
Start:1298404
Stop:1295409
Subelements:
TypeStartStopSize
5'UTR15050
exon1241241
exon35643176
exon52561793
exon69977375
exon11061210105
exon1299138991
exon14791684206
exon1770185384
exon1959202769
exon2109217163
exon22572497241
exon25842996413
3'UTR26552996342
Related elements:Group List
Evidences:Evidence List

References
Confidence:TAIR ath release 10.0
Publications:PubMed
External links:TIGR TAIR
References:GO database
GO database
GO database
GO database
GO database
GO database
GO database

Gene family information
Show orthologous gene family: Gene family

Sequence report for AT4G02930.1
View sequence: CDS
spliced
unspliced
Protein

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Protein domain informations from SIMAP
Simap homologs in:-Viridiplantae
-Fungi
-Mammalia
Simap features:List protein features and domains in this gene

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