Arabidopsis thaliana project
| Name: AT3G52840.1 | Version:
10 |
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| Element type: | transcript |
| Description: | beta-galactosidase 2 |
| Comment: | beta-galactosidase 2 (BGAL2); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-galactosidase 12 (TAIR:AT4G26140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
| Contig: | chr3_pseudomolecule_TAIR9 |
| Size (bp): | 5187 |
| Spliced size (bp): | 2517 |
| Start: | 19581113 |
| Stop: | 19586299 |
| Subelements: |
| Type | Start | Stop | Size |
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| 5'UTR | 1 | 131 | 131 |
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| exon | 1 | 305 | 305 |
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| exon | 534 | 629 | 96 |
| exon | 722 | 834 | 113 |
| exon | 917 | 983 | 67 |
| exon | 1081 | 1173 | 93 |
| exon | 1249 | 1392 | 144 |
| exon | 2040 | 2128 | 89 |
| exon | 2235 | 2340 | 106 |
| exon | 2423 | 2507 | 85 |
| exon | 2588 | 2706 | 119 |
| exon | 2792 | 2953 | 162 |
| exon | 3217 | 3392 | 176 |
| exon | 3498 | 3607 | 110 |
| exon | 3688 | 3797 | 110 |
| exon | 3901 | 4011 | 111 |
| exon | 4101 | 4211 | 111 |
| exon | 4585 | 4790 | 206 |
| exon | 4874 | 5187 | 314 |
| 3'UTR | 4986 | 5187 | 202 |
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| Related elements: | Group List |
| Evidences: | Evidence List |
| Sequence report for AT3G52840.1 |
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| Protein domain informations from SIMAP |
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