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Arabidopsis thaliana project



Element Report

Name: AT3G52840.1Version: 10
Element type:transcript
Description:beta-galactosidase 2
Comment:beta-galactosidase 2 (BGAL2); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-galactosidase 12 (TAIR:AT4G26140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Contig:chr3_pseudomolecule_TAIR9

Gene features
Size (bp):5187
Spliced size (bp):2517
Start:19581113
Stop:19586299
Subelements:
TypeStartStopSize
5'UTR1131131
exon1305305
exon53462996
exon722834113
exon91798367
exon1081117393
exon12491392144
exon2040212889
exon22352340106
exon2423250785
exon25882706119
exon27922953162
exon32173392176
exon34983607110
exon36883797110
exon39014011111
exon41014211111
exon45854790206
exon48745187314
3'UTR49865187202
Related elements:Group List
Evidences:Evidence List

References
Confidence:TAIR ath release 10.0
Publications:PubMed
External links:TIGR TAIR
References:GO database
GO database
GO database
GO database
GO database
GO database
GO database
GO database
GO database

Gene family information
Show orthologous gene family: Gene family

Sequence report for AT3G52840.1
View sequence: CDS
spliced
unspliced
Protein

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Protein domain informations from SIMAP
Simap homologs in:-Viridiplantae
-Fungi
-Mammalia
Simap features:List protein features and domains in this gene

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