Arabidopsis thaliana project

Element Report

Name: AT3G17760.1	Version: 10

Element type:	transcript
Description:	glutamate decarboxylase 5
Comment:	glutamate decarboxylase 5 (GAD5); FUNCTIONS IN: calmodulin binding; INVOLVED IN: carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 4 (TAIR:AT2G02010.1); Has 2878 Blast hits to 2874 proteins in 881 species: Archae - 194; Bacteria - 1723; Metazoa - 150; Fungi - 353; Plants - 275; Viruses - 5; Other Eukaryotes - 178 (source: NCBI BLink).
Contig:	chr3_pseudomolecule_TAIR9

Gene features

Size (bp):

2066

Spliced size (bp):

1605

Start:

6080877

Stop:

6078812

Subelements:

Type	Start	Stop	Size
5'UTR	1	39	39
exon	1	122	122
exon	222	426	205
exon	518	718	201
exon	829	1297	469
exon	1379	1431	53
exon	1512	2066	555
3'UTR	1986	2066	81

Related elements:

Evidences:

References

Confidence:	TAIR ath release 10.0
Publications:	PubMed
External links:	TIGR TAIR
References:	GO database GO database GO database GO database GO database

Gene family information

Show orthologous gene family:

Sequence report for AT3G17760.1

View sequence:	CDS
	spliced
	unspliced
	Protein

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Protein domain informations from SIMAP

Simap homologs in:	-Viridiplantae
	-Fungi
	-Mammalia
Simap features:	List protein features and domains in this gene

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