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Input Data

Input data should be in FASTA format. Only A T C G are allowed. All triplets that contain at least one of not allowed nucleotides will be ignored and will be indicated as warnings. The number of ignored triplets will be indicated as third column for each analysed sequence.

Start of analysis

Select for your analysis classifiers developed using either EST or mRNA sequences. Some pairs of genomes can be analysed using only one of these classifiers. Upload your data and click "Calculate" to start analysis of your data. The maximum allowed size of EST file is 50 MB. If there are tasks submitted from other users, all of them will be analysed using FIFO queue. In some cases (particular for the Training) it can take considerable time and you may wish to provide your e-mail to be notified when your task will be finished.

Calculated results

The calculated results contain 5-fold cross-validation statistic for the training set, statistic on the number of sequences predicted for each genome and class predicted for each sequence. The user can also download results as XML file.

 

 

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