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GWAS Server - Downloads

Association results and R-Scripts from the Raffler et al. 2015 study (urine)

FileFile typeDescription
mGWAS_urine_SHIP-0_associations.zip
(130 MB)
ZIP archive Contains association results for targeted and non-targeted metabolic traits in urine (P < 0.05) and the pariwise ratios thereof (P < 1.0×10-4; P-Gain ≥ 10)
mGWAS_urine_SHIP-0_scripts_and_data.tar
(1.8 GB)
TAR archive R-scripts to process the PLINK output files. Run the scripts in the indicated order to generate Manhattan plots and to define the (LD-extended) loci.
mGWAS_urine_SHIP-0_scripts.tar
(0.03 MB)
TAR archive Like above, but without any input data (i.e., R-scripts only).

 

Association results from the Shin et al. 2014 study (serum)

FileFile typeDescription
shin_et_al.associations.tar.gz
(3.2 MB)
GZIP-compressed TAR This archive contains association data for metabolites, xenobiotics and metabolite ratios with a Pmeta ≤ 1·10-5. Details on the files are given in the README provided with the archive.
shin_et_al.metal.out.tar.gz
(74.2 GB)
GZIP-compressed TAR This archive contains all association data for the metabolites contained in our study in Metal output format (see http://www.sph.umich.edu/csg/abecasis/metal/). Details on the files are given in the README provided with the archive.
shin_et_al.xeno.metal.out.tar.gz
(6.2 GB)
GZIP-compressed TAR This archive contains all association data for the xenobiotics contained in our study in Metal output format (see http://www.sph.umich.edu/csg/abecasis/metal/). Details on the files are given in the README provided with the archive.