Arabidopsis thaliana project

Element Report

Name: AT3G27700.1	Version: 9

Element type:	transcript
Description:	RNA recognition motif (RRM)-containing protein
Comment:	RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 3937 Blast hits to 2269 proteins in 214 species: Archae - 4; Bacteria - 261; Metazoa - 1077; Fungi - 214; Plants - 103; Viruses - 7; Other Eukaryotes - 2271 (source: NCBI BLink).
Contig:	chr3_pseudomolecule_TAIR9

Gene features

Size (bp):

4858

Spliced size (bp):

3689

Start:

10261974

Stop:

10257117

Subelements:

Type	Start	Stop	Size
5'UTR	1	644	644
exon	1	352	352
exon	599	1352	754
exon	1771	2940	1170
exon	3302	3616	315
exon	3761	4858	1098
3'UTR	4295	4858	564

Related elements:

Evidences:

References

Confidence:	TAIR ath release 9.0
Publications:	PubMed
External links:	TIGR TAIR
References:	GO database GO:0005575 GO database GO:0000166 GO database GO:0003676 GO database GO:0003723 GO database GO:0008270 GO database GO:0008150

Sequence report for AT3G27700.1

View sequence:	CDS
	spliced
	unspliced
	Protein

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Protein domain informations from SIMAP

Simap homologs in:	-Viridiplantae
	-Fungi
	-Mammalia
Simap features:	List protein features and domains in this gene

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