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Home > List > Detailed view

General information


493
16192569
Homo sapiens (9606)
disease - expression profile
Squamous cell carcinoma, head and neck

Study information


Cell culture study
squamous cell carcinoma cell line
used cell line: SCC17B

miRNA list


Nr miRNA Method Further methods Evidence Foldchange Genes
1 hsa-mir-200a quantitative PCR miRNA overexpression 403.92
2 hsa-mir-210 quantitative PCR miRNA overexpression 143.5
3 hsa-mir-367 quantitative PCR miRNA downregulation 100
4 hsa-mir-198 quantitative PCR miRNA downregulation 100
5 hsa-mir-381 quantitative PCR miRNA downregulation 100
6 hsa-mir-33a quantitative PCR miRNA downregulation 100
7 hsa-mir-376c quantitative PCR miRNA downregulation 100
8 hsa-mir-335 quantitative PCR miRNA downregulation 100
9 hsa-mir-382 quantitative PCR miRNA downregulation 100
10 hsa-mir-20a quantitative PCR miRNA downregulation 100
11 hsa-mir-380 quantitative PCR miRNA downregulation 100
12 hsa-mir-96 quantitative PCR miRNA overexpression 83.35
13 hsa-mir-9-1 quantitative PCR miRNA overexpression 68.05
14 hsa-mir-138-1 quantitative PCR miRNA downregulation 50
15 hsa-mir-95 quantitative PCR miRNA downregulation 50
16 hsa-mir-155 quantitative PCR miRNA downregulation 50
17 hsa-mir-10b quantitative PCR miRNA downregulation 50
18 hsa-mir-138-2 quantitative PCR miRNA downregulation 50
19 hsa-mir-10a quantitative PCR miRNA downregulation 50
20 hsa-mir-217 quantitative PCR miRNA downregulation 50
21 hsa-let-7a-2 quantitative PCR miRNA downregulation 50
22 hsa-mir-21 quantitative PCR miRNA overexpression 46.67
23 hsa-mir-127 quantitative PCR miRNA overexpression 39.41
24 hsa-mir-24-2 quantitative PCR miRNA overexpression 36.52
25 hsa-mir-24-1 quantitative PCR miRNA overexpression 36.52
26 hsa-mir-191 quantitative PCR miRNA downregulation 33.333
27 hsa-mir-144 quantitative PCR miRNA downregulation 33.333
28 hsa-let-7a-1 quantitative PCR miRNA downregulation 33.333
29 hsa-mir-135a-2 quantitative PCR miRNA downregulation 25
30 hsa-mir-146a quantitative PCR miRNA downregulation 25
31 hsa-mir-135a-1 quantitative PCR miRNA downregulation 25
32 hsa-let-7i quantitative PCR miRNA downregulation 25
33 hsa-mir-197 quantitative PCR miRNA overexpression 24.83
34 hsa-let-7e quantitative PCR miRNA downregulation 20
35 hsa-let-7b quantitative PCR miRNA downregulation 20
36 hsa-mir-31 quantitative PCR miRNA overexpression 18.64
37 hsa-mir-128-1 quantitative PCR miRNA overexpression 18.07
38 hsa-mir-195 quantitative PCR miRNA overexpression 18.05
39 hsa-mir-137 quantitative PCR miRNA downregulation 16.667
40 hsa-mir-92a-1 quantitative PCR miRNA downregulation 16.667
41 hsa-mir-424 quantitative PCR miRNA downregulation 16.667
42 hsa-mir-107 quantitative PCR miRNA overexpression 16.04
43 hsa-let-7f-2 quantitative PCR miRNA downregulation 14.286
44 hsa-mir-194-2 quantitative PCR miRNA downregulation 14.286
45 hsa-mir-154 quantitative PCR miRNA downregulation 14.286
46 hsa-mir-194-1 quantitative PCR miRNA downregulation 14.286
47 hsa-mir-7-1 quantitative PCR miRNA downregulation 14.286
48 hsa-mir-141 quantitative PCR miRNA downregulation 14.286
49 hsa-mir-196b quantitative PCR miRNA overexpression 13.75
50 hsa-mir-199a-2 quantitative PCR miRNA overexpression 12.78
51 hsa-mir-223 quantitative PCR miRNA downregulation 12.5
52 hsa-mir-32 quantitative PCR miRNA downregulation 12.5
53 hsa-let-7f-1 quantitative PCR miRNA downregulation 12.5
54 hsa-mir-199a-1 quantitative PCR miRNA overexpression 11.4
55 hsa-mir-302d quantitative PCR miRNA downregulation 11.111
56 hsa-mir-19b-1 quantitative PCR miRNA overexpression 10.69
57 hsa-mir-103-1 quantitative PCR miRNA overexpression 10.33
58 hsa-mir-103-2 quantitative PCR miRNA overexpression 10.33
59 hsa-mir-136 quantitative PCR miRNA downregulation 10
60 hsa-mir-211 quantitative PCR miRNA overexpression 9.19
61 hsa-mir-130a quantitative PCR miRNA overexpression 9.13
62 hsa-mir-302c quantitative PCR miRNA downregulation 9.091
63 hsa-mir-383 quantitative PCR miRNA downregulation 9.091
64 hsa-mir-132 quantitative PCR miRNA downregulation 9.091
65 hsa-mir-101-1 quantitative PCR miRNA downregulation 9.091
66 hsa-let-7g quantitative PCR miRNA downregulation 8.333
67 hsa-mir-181b-1 quantitative PCR miRNA downregulation 8.333
68 hsa-mir-1-1 quantitative PCR miRNA downregulation 8.333
69 hsa-mir-372 quantitative PCR miRNA downregulation 8.333
70 hsa-mir-181b-2 quantitative PCR miRNA downregulation 8.333
71 hsa-mir-151 quantitative PCR miRNA downregulation 8.333
72 hsa-mir-98 quantitative PCR miRNA overexpression 8.29
73 hsa-mir-129-2 quantitative PCR miRNA overexpression 8.27
74 hsa-mir-93 quantitative PCR miRNA overexpression 8.13
75 hsa-mir-185 quantitative PCR miRNA overexpression 7.93
76 hsa-mir-9-3 quantitative PCR miRNA downregulation 7.143
77 hsa-mir-125b-2 quantitative PCR miRNA downregulation 7.143
78 hsa-mir-142 quantitative PCR miRNA overexpression 6.99
79 hsa-mir-134 quantitative PCR miRNA overexpression 6.89
80 hsa-mir-199b quantitative PCR miRNA overexpression 6.77
81 hsa-mir-422a quantitative PCR miRNA downregulation 6.667
82 hsa-mir-183 quantitative PCR miRNA downregulation 6.667
83 hsa-mir-125b-1 quantitative PCR miRNA downregulation 6.667
84 hsa-mir-425 quantitative PCR miRNA downregulation 6.667
85 hsa-mir-106b quantitative PCR miRNA overexpression 6.51
86 hsa-let-7a-3 quantitative PCR miRNA downregulation 6.25
87 hsa-mir-218-1 quantitative PCR miRNA overexpression 6.06
88 hsa-mir-218-2 quantitative PCR miRNA overexpression 6.06
89 hsa-mir-215 quantitative PCR miRNA downregulation 5.882
90 hsa-mir-7-3 quantitative PCR miRNA downregulation 5.556
91 hsa-mir-326 quantitative PCR miRNA downregulation 5.556
92 hsa-mir-190 quantitative PCR miRNA downregulation 5.556
93 hsa-mir-30e quantitative PCR miRNA downregulation 5.556
94 hsa-mir-203 quantitative PCR miRNA downregulation 5.556
95 hsa-mir-30a quantitative PCR miRNA downregulation 5.556
96 hsa-mir-9-2 quantitative PCR miRNA overexpression 5.52
97 hsa-mir-376a-1 quantitative PCR miRNA downregulation 5.263
98 hsa-mir-340 quantitative PCR miRNA downregulation 5.263
99 hsa-mir-16-2 quantitative PCR miRNA overexpression 5.25
100 hsa-mir-345 quantitative PCR miRNA overexpression 5.2
101 hsa-mir-99b quantitative PCR miRNA overexpression 5.1
102 hsa-mir-133b quantitative PCR miRNA overexpression 5.02
103 hsa-mir-122 quantitative PCR miRNA downregulation 5
104 hsa-mir-106a quantitative PCR miRNA downregulation 5
105 hsa-mir-302a quantitative PCR miRNA downregulation 5
106 hsa-mir-214 quantitative PCR miRNA overexpression 4.95
107 hsa-mir-34a quantitative PCR miRNA overexpression 4.87
108 hsa-mir-28 quantitative PCR miRNA downregulation 4.762
109 hsa-mir-206 quantitative PCR miRNA downregulation 4.545
110 hsa-mir-377 quantitative PCR miRNA downregulation 4.545
111 hsa-mir-328 quantitative PCR miRNA overexpression 4.53
112 hsa-mir-99a quantitative PCR miRNA downregulation 4.348
113 hsa-mir-34b quantitative PCR miRNA downregulation 4.348
114 hsa-mir-147 quantitative PCR miRNA downregulation 4.348
115 hsa-mir-17 quantitative PCR miRNA overexpression 4.33
116 hsa-mir-153-2 quantitative PCR miRNA downregulation 4.167
117 hsa-mir-208a quantitative PCR miRNA downregulation 4.167
118 hsa-mir-153-1 quantitative PCR miRNA downregulation 4.167
119 hsa-mir-205 quantitative PCR miRNA overexpression 4.06
120 hsa-mir-133a-1 quantitative PCR miRNA overexpression 3.83
121 hsa-mir-133a-2 quantitative PCR miRNA overexpression 3.83
122 hsa-mir-23a quantitative PCR miRNA overexpression 3.82
123 hsa-mir-200c quantitative PCR miRNA downregulation 3.704
124 hsa-mir-375 quantitative PCR miRNA downregulation 3.704
125 hsa-mir-378 quantitative PCR miRNA downregulation 3.704
126 hsa-mir-204 quantitative PCR miRNA overexpression 3.55
127 hsa-mir-200b quantitative PCR miRNA downregulation 3.448
128 hsa-mir-184 quantitative PCR miRNA overexpression 3.42
129 hsa-mir-148a quantitative PCR miRNA downregulation 3.333
130 hsa-mir-101-2 quantitative PCR miRNA overexpression 3.31
131 hsa-mir-302b quantitative PCR miRNA downregulation 3.226
132 hsa-mir-371 quantitative PCR miRNA overexpression 3.16
133 hsa-mir-26b quantitative PCR miRNA overexpression 3.14
134 hsa-mir-301a quantitative PCR miRNA overexpression 3.11
135 hsa-let-7d quantitative PCR miRNA downregulation 2.941
136 hsa-mir-331 quantitative PCR miRNA downregulation 2.941
137 hsa-mir-149 quantitative PCR miRNA overexpression 2.85
138 hsa-mir-186 quantitative PCR miRNA overexpression 2.78
139 hsa-mir-15b quantitative PCR miRNA overexpression 2.78
140 hsa-mir-1-2 quantitative PCR miRNA downregulation 2.778
141 hsa-mir-128-2 quantitative PCR miRNA overexpression 2.74
142 hsa-mir-26a-2 quantitative PCR miRNA downregulation 2.703
143 hsa-mir-26a-1 quantitative PCR miRNA downregulation 2.703
144 hsa-mir-325 quantitative PCR miRNA downregulation 2.703
145 hsa-mir-130b quantitative PCR miRNA downregulation 2.632
146 hsa-mir-92a-2 quantitative PCR miRNA downregulation 2.632
147 hsa-mir-23b quantitative PCR miRNA overexpression 2.61
148 hsa-mir-346 quantitative PCR miRNA overexpression 2.6
149 hsa-mir-125a quantitative PCR miRNA overexpression 2.59
150 hsa-mir-339 quantitative PCR miRNA overexpression 2.53
151 hsa-mir-181a-1 quantitative PCR miRNA downregulation 2.5
152 hsa-mir-27a quantitative PCR miRNA overexpression 2.46
153 hsa-mir-27b quantitative PCR miRNA overexpression 2.46
154 hsa-mir-373 quantitative PCR miRNA downregulation 2.381
155 hsa-mir-182 quantitative PCR miRNA overexpression 2.33
156 hsa-mir-296 quantitative PCR miRNA downregulation 2.326
157 hsa-mir-139 quantitative PCR miRNA overexpression 2.25
158 hsa-mir-361 quantitative PCR miRNA downregulation 2.222
159 hsa-mir-181a-2 quantitative PCR miRNA downregulation 2.174
160 hsa-mir-29b-2 quantitative PCR miRNA downregulation 2.174
161 hsa-mir-181c quantitative PCR miRNA downregulation 2.174
162 hsa-mir-29b-1 quantitative PCR miRNA downregulation 2.174
163 hsa-mir-19a quantitative PCR miRNA downregulation 2.128
164 hsa-mir-105-2 quantitative PCR miRNA downregulation 2.083
165 hsa-mir-105-1 quantitative PCR miRNA downregulation 2.083
166 hsa-mir-323 quantitative PCR miRNA downregulation 2.041
167 hsa-mir-100 quantitative PCR miRNA overexpression 2.01
168 hsa-mir-299 quantitative PCR miRNA overexpression 1.98
169 hsa-mir-18a quantitative PCR miRNA overexpression 1.9
170 hsa-mir-222 quantitative PCR miRNA downregulation 1.852
171 hsa-mir-337 quantitative PCR miRNA overexpression 1.83
172 hsa-mir-324 quantitative PCR miRNA overexpression 1.73
173 hsa-mir-30b quantitative PCR miRNA overexpression 1.67
174 hsa-mir-379 quantitative PCR miRNA downregulation 1.667
175 hsa-mir-148b quantitative PCR miRNA downregulation 1.639
176 hsa-mir-196a-2 quantitative PCR miRNA downregulation 1.613
177 hsa-mir-216a quantitative PCR miRNA downregulation 1.587
178 hsa-mir-342 quantitative PCR miRNA downregulation 1.587
179 hsa-mir-7-2 quantitative PCR miRNA downregulation 1.562
180 hsa-mir-29c quantitative PCR miRNA overexpression 1.56
181 hsa-mir-29a quantitative PCR miRNA overexpression 1.56
182 hsa-mir-423 quantitative PCR miRNA downregulation 1.538
183 hsa-mir-188 quantitative PCR miRNA downregulation 1.493
184 hsa-mir-219-1 quantitative PCR miRNA overexpression 1.45
185 hsa-mir-219-2 quantitative PCR miRNA overexpression 1.45
186 hsa-mir-124-1 quantitative PCR miRNA downregulation 1.449
187 hsa-mir-124-3 quantitative PCR miRNA downregulation 1.449
188 hsa-mir-124-2 quantitative PCR miRNA downregulation 1.449
189 hsa-mir-135b quantitative PCR miRNA downregulation 1.449
190 hsa-mir-224 quantitative PCR miRNA downregulation 1.408
191 hsa-mir-143 quantitative PCR miRNA downregulation 1.389
192 hsa-mir-320a quantitative PCR miRNA downregulation 1.37
193 hsa-mir-212 quantitative PCR miRNA downregulation 1.37
194 hsa-mir-16-1 quantitative PCR miRNA overexpression 1.36
195 hsa-mir-221 quantitative PCR miRNA downregulation 1.333
196 hsa-mir-152 quantitative PCR miRNA overexpression 1.33
197 hsa-mir-126 quantitative PCR miRNA overexpression 1.29
198 hsa-mir-22 quantitative PCR miRNA overexpression 1.25
199 hsa-mir-370 quantitative PCR miRNA downregulation 1.235
200 hsa-mir-30c-1 quantitative PCR miRNA overexpression 1.21
201 hsa-mir-30c-2 quantitative PCR miRNA overexpression 1.21
202 hsa-mir-330 quantitative PCR miRNA downregulation 1.176
203 hsa-mir-150 quantitative PCR miRNA downregulation 1.163
204 hsa-mir-25 quantitative PCR miRNA downregulation 1.163
205 hsa-mir-365-2 quantitative PCR miRNA downregulation 1.149
206 hsa-mir-196a-1 quantitative PCR miRNA downregulation 1.099
207 hsa-mir-338 quantitative PCR miRNA downregulation 1.099
208 hsa-mir-187 quantitative PCR miRNA downregulation 1.053
209 hsa-mir-15a quantitative PCR miRNA overexpression 1.05
210 hsa-mir-145 quantitative PCR miRNA overexpression 1.04
211 hsa-mir-220a quantitative PCR miRNA overexpression 1.01

Detailed information about selected miRNA


hsa-mir-92a-2
Authors' designation: MIR-092-2-P;
quantitative PCR
miRNA downregulation
2.632    

Genes associated with selected miRNA


target gene regulation mechanism of regulation comment

Comments


General comment: Real-time expression profiling of microRNA precursors; Annotation data from supplementary table 4. MIR-321 could not be annotated.