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Home > List > Detailed view

General information


493
16192569
Homo sapiens (9606)
disease - expression profile
Squamous cell carcinoma, head and neck

Study information


Cell culture study
squamous cell carcinoma cell line
used cell line: SCC17B

miRNA list


Nr miRNA Method Further methods Evidence Foldchange Genes
1 hsa-mir-99b quantitative PCR miRNA overexpression 5.1
2 hsa-mir-99a quantitative PCR miRNA downregulation 4.348
3 hsa-mir-98 quantitative PCR miRNA overexpression 8.29
4 hsa-mir-96 quantitative PCR miRNA overexpression 83.35
5 hsa-mir-95 quantitative PCR miRNA downregulation 50
6 hsa-mir-93 quantitative PCR miRNA overexpression 8.13
7 hsa-mir-92a-2 quantitative PCR miRNA downregulation 2.632
8 hsa-mir-92a-1 quantitative PCR miRNA downregulation 16.667
9 hsa-mir-9-3 quantitative PCR miRNA downregulation 7.143
10 hsa-mir-9-2 quantitative PCR miRNA overexpression 5.52
11 hsa-mir-9-1 quantitative PCR miRNA overexpression 68.05
12 hsa-mir-7-3 quantitative PCR miRNA downregulation 5.556
13 hsa-mir-7-2 quantitative PCR miRNA downregulation 1.562
14 hsa-mir-7-1 quantitative PCR miRNA downregulation 14.286
15 hsa-mir-425 quantitative PCR miRNA downregulation 6.667
16 hsa-mir-424 quantitative PCR miRNA downregulation 16.667
17 hsa-mir-423 quantitative PCR miRNA downregulation 1.538
18 hsa-mir-422a quantitative PCR miRNA downregulation 6.667
19 hsa-mir-383 quantitative PCR miRNA downregulation 9.091
20 hsa-mir-382 quantitative PCR miRNA downregulation 100
21 hsa-mir-381 quantitative PCR miRNA downregulation 100
22 hsa-mir-380 quantitative PCR miRNA downregulation 100
23 hsa-mir-379 quantitative PCR miRNA downregulation 1.667
24 hsa-mir-378 quantitative PCR miRNA downregulation 3.704
25 hsa-mir-377 quantitative PCR miRNA downregulation 4.545
26 hsa-mir-376c quantitative PCR miRNA downregulation 100
27 hsa-mir-376a-1 quantitative PCR miRNA downregulation 5.263
28 hsa-mir-375 quantitative PCR miRNA downregulation 3.704
29 hsa-mir-373 quantitative PCR miRNA downregulation 2.381
30 hsa-mir-372 quantitative PCR miRNA downregulation 8.333
31 hsa-mir-371 quantitative PCR miRNA overexpression 3.16
32 hsa-mir-370 quantitative PCR miRNA downregulation 1.235
33 hsa-mir-367 quantitative PCR miRNA downregulation 100
34 hsa-mir-365-2 quantitative PCR miRNA downregulation 1.149
35 hsa-mir-361 quantitative PCR miRNA downregulation 2.222
36 hsa-mir-34b quantitative PCR miRNA downregulation 4.348
37 hsa-mir-34a quantitative PCR miRNA overexpression 4.87
38 hsa-mir-346 quantitative PCR miRNA overexpression 2.6
39 hsa-mir-345 quantitative PCR miRNA overexpression 5.2
40 hsa-mir-342 quantitative PCR miRNA downregulation 1.587
41 hsa-mir-340 quantitative PCR miRNA downregulation 5.263
42 hsa-mir-33a quantitative PCR miRNA downregulation 100
43 hsa-mir-339 quantitative PCR miRNA overexpression 2.53
44 hsa-mir-338 quantitative PCR miRNA downregulation 1.099
45 hsa-mir-337 quantitative PCR miRNA overexpression 1.83
46 hsa-mir-335 quantitative PCR miRNA downregulation 100
47 hsa-mir-331 quantitative PCR miRNA downregulation 2.941
48 hsa-mir-330 quantitative PCR miRNA downregulation 1.176
49 hsa-mir-328 quantitative PCR miRNA overexpression 4.53
50 hsa-mir-326 quantitative PCR miRNA downregulation 5.556
51 hsa-mir-325 quantitative PCR miRNA downregulation 2.703
52 hsa-mir-324 quantitative PCR miRNA overexpression 1.73
53 hsa-mir-323 quantitative PCR miRNA downregulation 2.041
54 hsa-mir-320a quantitative PCR miRNA downregulation 1.37
55 hsa-mir-32 quantitative PCR miRNA downregulation 12.5
56 hsa-mir-31 quantitative PCR miRNA overexpression 18.64
57 hsa-mir-30e quantitative PCR miRNA downregulation 5.556
58 hsa-mir-30c-2 quantitative PCR miRNA overexpression 1.21
59 hsa-mir-30c-1 quantitative PCR miRNA overexpression 1.21
60 hsa-mir-30b quantitative PCR miRNA overexpression 1.67
61 hsa-mir-30a quantitative PCR miRNA downregulation 5.556
62 hsa-mir-302d quantitative PCR miRNA downregulation 11.111
63 hsa-mir-302c quantitative PCR miRNA downregulation 9.091
64 hsa-mir-302b quantitative PCR miRNA downregulation 3.226
65 hsa-mir-302a quantitative PCR miRNA downregulation 5
66 hsa-mir-301a quantitative PCR miRNA overexpression 3.11
67 hsa-mir-29c quantitative PCR miRNA overexpression 1.56
68 hsa-mir-29b-2 quantitative PCR miRNA downregulation 2.174
69 hsa-mir-29b-1 quantitative PCR miRNA downregulation 2.174
70 hsa-mir-29a quantitative PCR miRNA overexpression 1.56
71 hsa-mir-299 quantitative PCR miRNA overexpression 1.98
72 hsa-mir-296 quantitative PCR miRNA downregulation 2.326
73 hsa-mir-28 quantitative PCR miRNA downregulation 4.762
74 hsa-mir-27b quantitative PCR miRNA overexpression 2.46
75 hsa-mir-27a quantitative PCR miRNA overexpression 2.46
76 hsa-mir-26b quantitative PCR miRNA overexpression 3.14
77 hsa-mir-26a-2 quantitative PCR miRNA downregulation 2.703
78 hsa-mir-26a-1 quantitative PCR miRNA downregulation 2.703
79 hsa-mir-25 quantitative PCR miRNA downregulation 1.163
80 hsa-mir-24-2 quantitative PCR miRNA overexpression 36.52
81 hsa-mir-24-1 quantitative PCR miRNA overexpression 36.52
82 hsa-mir-23b quantitative PCR miRNA overexpression 2.61
83 hsa-mir-23a quantitative PCR miRNA overexpression 3.82
84 hsa-mir-224 quantitative PCR miRNA downregulation 1.408
85 hsa-mir-223 quantitative PCR miRNA downregulation 12.5
86 hsa-mir-222 quantitative PCR miRNA downregulation 1.852
87 hsa-mir-221 quantitative PCR miRNA downregulation 1.333
88 hsa-mir-220a quantitative PCR miRNA overexpression 1.01
89 hsa-mir-22 quantitative PCR miRNA overexpression 1.25
90 hsa-mir-219-2 quantitative PCR miRNA overexpression 1.45
91 hsa-mir-219-1 quantitative PCR miRNA overexpression 1.45
92 hsa-mir-218-2 quantitative PCR miRNA overexpression 6.06
93 hsa-mir-218-1 quantitative PCR miRNA overexpression 6.06
94 hsa-mir-217 quantitative PCR miRNA downregulation 50
95 hsa-mir-216a quantitative PCR miRNA downregulation 1.587
96 hsa-mir-215 quantitative PCR miRNA downregulation 5.882
97 hsa-mir-214 quantitative PCR miRNA overexpression 4.95
98 hsa-mir-212 quantitative PCR miRNA downregulation 1.37
99 hsa-mir-211 quantitative PCR miRNA overexpression 9.19
100 hsa-mir-210 quantitative PCR miRNA overexpression 143.5
101 hsa-mir-21 quantitative PCR miRNA overexpression 46.67
102 hsa-mir-20a quantitative PCR miRNA downregulation 100
103 hsa-mir-208a quantitative PCR miRNA downregulation 4.167
104 hsa-mir-206 quantitative PCR miRNA downregulation 4.545
105 hsa-mir-205 quantitative PCR miRNA overexpression 4.06
106 hsa-mir-204 quantitative PCR miRNA overexpression 3.55
107 hsa-mir-203 quantitative PCR miRNA downregulation 5.556
108 hsa-mir-200c quantitative PCR miRNA downregulation 3.704
109 hsa-mir-200b quantitative PCR miRNA downregulation 3.448
110 hsa-mir-200a quantitative PCR miRNA overexpression 403.92
111 hsa-mir-19b-1 quantitative PCR miRNA overexpression 10.69
112 hsa-mir-19a quantitative PCR miRNA downregulation 2.128
113 hsa-mir-199b quantitative PCR miRNA overexpression 6.77
114 hsa-mir-199a-2 quantitative PCR miRNA overexpression 12.78
115 hsa-mir-199a-1 quantitative PCR miRNA overexpression 11.4
116 hsa-mir-198 quantitative PCR miRNA downregulation 100
117 hsa-mir-197 quantitative PCR miRNA overexpression 24.83
118 hsa-mir-196b quantitative PCR miRNA overexpression 13.75
119 hsa-mir-196a-2 quantitative PCR miRNA downregulation 1.613
120 hsa-mir-196a-1 quantitative PCR miRNA downregulation 1.099
121 hsa-mir-195 quantitative PCR miRNA overexpression 18.05
122 hsa-mir-194-2 quantitative PCR miRNA downregulation 14.286
123 hsa-mir-194-1 quantitative PCR miRNA downregulation 14.286
124 hsa-mir-191 quantitative PCR miRNA downregulation 33.333
125 hsa-mir-190 quantitative PCR miRNA downregulation 5.556
126 hsa-mir-18a quantitative PCR miRNA overexpression 1.9
127 hsa-mir-188 quantitative PCR miRNA downregulation 1.493
128 hsa-mir-187 quantitative PCR miRNA downregulation 1.053
129 hsa-mir-186 quantitative PCR miRNA overexpression 2.78
130 hsa-mir-185 quantitative PCR miRNA overexpression 7.93
131 hsa-mir-184 quantitative PCR miRNA overexpression 3.42
132 hsa-mir-183 quantitative PCR miRNA downregulation 6.667
133 hsa-mir-182 quantitative PCR miRNA overexpression 2.33
134 hsa-mir-181c quantitative PCR miRNA downregulation 2.174
135 hsa-mir-181b-2 quantitative PCR miRNA downregulation 8.333
136 hsa-mir-181b-1 quantitative PCR miRNA downregulation 8.333
137 hsa-mir-181a-2 quantitative PCR miRNA downregulation 2.174
138 hsa-mir-181a-1 quantitative PCR miRNA downregulation 2.5
139 hsa-mir-17 quantitative PCR miRNA overexpression 4.33
140 hsa-mir-16-2 quantitative PCR miRNA overexpression 5.25
141 hsa-mir-16-1 quantitative PCR miRNA overexpression 1.36
142 hsa-mir-15b quantitative PCR miRNA overexpression 2.78
143 hsa-mir-15a quantitative PCR miRNA overexpression 1.05
144 hsa-mir-155 quantitative PCR miRNA downregulation 50
145 hsa-mir-154 quantitative PCR miRNA downregulation 14.286
146 hsa-mir-153-2 quantitative PCR miRNA downregulation 4.167
147 hsa-mir-153-1 quantitative PCR miRNA downregulation 4.167
148 hsa-mir-152 quantitative PCR miRNA overexpression 1.33
149 hsa-mir-151 quantitative PCR miRNA downregulation 8.333
150 hsa-mir-150 quantitative PCR miRNA downregulation 1.163
151 hsa-mir-149 quantitative PCR miRNA overexpression 2.85
152 hsa-mir-148b quantitative PCR miRNA downregulation 1.639
153 hsa-mir-148a quantitative PCR miRNA downregulation 3.333
154 hsa-mir-147 quantitative PCR miRNA downregulation 4.348
155 hsa-mir-146a quantitative PCR miRNA downregulation 25
156 hsa-mir-145 quantitative PCR miRNA overexpression 1.04
157 hsa-mir-144 quantitative PCR miRNA downregulation 33.333
158 hsa-mir-143 quantitative PCR miRNA downregulation 1.389
159 hsa-mir-142 quantitative PCR miRNA overexpression 6.99
160 hsa-mir-141 quantitative PCR miRNA downregulation 14.286
161 hsa-mir-139 quantitative PCR miRNA overexpression 2.25
162 hsa-mir-138-2 quantitative PCR miRNA downregulation 50
163 hsa-mir-138-1 quantitative PCR miRNA downregulation 50
164 hsa-mir-137 quantitative PCR miRNA downregulation 16.667
165 hsa-mir-136 quantitative PCR miRNA downregulation 10
166 hsa-mir-135b quantitative PCR miRNA downregulation 1.449
167 hsa-mir-135a-2 quantitative PCR miRNA downregulation 25
168 hsa-mir-135a-1 quantitative PCR miRNA downregulation 25
169 hsa-mir-134 quantitative PCR miRNA overexpression 6.89
170 hsa-mir-133b quantitative PCR miRNA overexpression 5.02
171 hsa-mir-133a-2 quantitative PCR miRNA overexpression 3.83
172 hsa-mir-133a-1 quantitative PCR miRNA overexpression 3.83
173 hsa-mir-132 quantitative PCR miRNA downregulation 9.091
174 hsa-mir-130b quantitative PCR miRNA downregulation 2.632
175 hsa-mir-130a quantitative PCR miRNA overexpression 9.13
176 hsa-mir-129-2 quantitative PCR miRNA overexpression 8.27
177 hsa-mir-128-2 quantitative PCR miRNA overexpression 2.74
178 hsa-mir-128-1 quantitative PCR miRNA overexpression 18.07
179 hsa-mir-127 quantitative PCR miRNA overexpression 39.41
180 hsa-mir-126 quantitative PCR miRNA overexpression 1.29
181 hsa-mir-125b-2 quantitative PCR miRNA downregulation 7.143
182 hsa-mir-125b-1 quantitative PCR miRNA downregulation 6.667
183 hsa-mir-125a quantitative PCR miRNA overexpression 2.59
184 hsa-mir-124-3 quantitative PCR miRNA downregulation 1.449
185 hsa-mir-124-2 quantitative PCR miRNA downregulation 1.449
186 hsa-mir-124-1 quantitative PCR miRNA downregulation 1.449
187 hsa-mir-122 quantitative PCR miRNA downregulation 5
188 hsa-mir-10b quantitative PCR miRNA downregulation 50
189 hsa-mir-10a quantitative PCR miRNA downregulation 50
190 hsa-mir-107 quantitative PCR miRNA overexpression 16.04
191 hsa-mir-106b quantitative PCR miRNA overexpression 6.51
192 hsa-mir-106a quantitative PCR miRNA downregulation 5
193 hsa-mir-105-2 quantitative PCR miRNA downregulation 2.083
194 hsa-mir-105-1 quantitative PCR miRNA downregulation 2.083
195 hsa-mir-103-2 quantitative PCR miRNA overexpression 10.33
196 hsa-mir-103-1 quantitative PCR miRNA overexpression 10.33
197 hsa-mir-101-2 quantitative PCR miRNA overexpression 3.31
198 hsa-mir-101-1 quantitative PCR miRNA downregulation 9.091
199 hsa-mir-100 quantitative PCR miRNA overexpression 2.01
200 hsa-mir-1-2 quantitative PCR miRNA downregulation 2.778
201 hsa-mir-1-1 quantitative PCR miRNA downregulation 8.333
202 hsa-let-7i quantitative PCR miRNA downregulation 25
203 hsa-let-7g quantitative PCR miRNA downregulation 8.333
204 hsa-let-7f-2 quantitative PCR miRNA downregulation 14.286
205 hsa-let-7f-1 quantitative PCR miRNA downregulation 12.5
206 hsa-let-7e quantitative PCR miRNA downregulation 20
207 hsa-let-7d quantitative PCR miRNA downregulation 2.941
208 hsa-let-7b quantitative PCR miRNA downregulation 20
209 hsa-let-7a-3 quantitative PCR miRNA downregulation 6.25
210 hsa-let-7a-2 quantitative PCR miRNA downregulation 50
211 hsa-let-7a-1 quantitative PCR miRNA downregulation 33.333

Detailed information about selected miRNA


hsa-let-7i
quantitative PCR
miRNA downregulation
25    

Genes associated with selected miRNA


target gene regulation mechanism of regulation comment

Comments


General comment: Real-time expression profiling of microRNA precursors; Annotation data from supplementary table 4. MIR-321 could not be annotated.