General search


List as:
Entries miRNAs
Search type:
Fuzzy Strict


help

Specific search


List as:
Entries miRNAs
Search type:
Fuzzy Strict

help
About phenomir
Download

List all entries
List all diseases
List all miRNAs

Home

© 2009 - Helmholtz Zentrum München - German Research Center for Environmental Health (GmbH) Ingolstädter Landstraße 1, D-85764 Neuherberg, Germany


Imprint


Disclaimer:
MIPS Databases and associated information are protected by copyright. This server and its associated data and services are for academic, non-commercial use only. The Helmholtz Zentrum München has no liability for the use of results, data or information which have been provided through this server. Neither the use for commercial purposes, nor the redistribution of MIPS database files to third parties nor the distribution of parts of files or derivative products to any third parties is permitted.

Home > List > Detailed view

General information


493
16192569
Homo sapiens (9606)
disease - expression profile
Squamous cell carcinoma, head and neck

Study information


Cell culture study
squamous cell carcinoma cell line
used cell line: SCC17B

miRNA list


Nr miRNA Method Further methods Evidence Foldchange Genes
1 hsa-let-7a-1 quantitative PCR miRNA downregulation 33.333
2 hsa-let-7a-2 quantitative PCR miRNA downregulation 50
3 hsa-let-7a-3 quantitative PCR miRNA downregulation 6.25
4 hsa-let-7b quantitative PCR miRNA downregulation 20
5 hsa-let-7d quantitative PCR miRNA downregulation 2.941
6 hsa-let-7e quantitative PCR miRNA downregulation 20
7 hsa-let-7f-1 quantitative PCR miRNA downregulation 12.5
8 hsa-let-7f-2 quantitative PCR miRNA downregulation 14.286
9 hsa-let-7g quantitative PCR miRNA downregulation 8.333
10 hsa-let-7i quantitative PCR miRNA downregulation 25
11 hsa-mir-1-1 quantitative PCR miRNA downregulation 8.333
12 hsa-mir-1-2 quantitative PCR miRNA downregulation 2.778
13 hsa-mir-100 quantitative PCR miRNA overexpression 2.01
14 hsa-mir-101-1 quantitative PCR miRNA downregulation 9.091
15 hsa-mir-101-2 quantitative PCR miRNA overexpression 3.31
16 hsa-mir-103-1 quantitative PCR miRNA overexpression 10.33
17 hsa-mir-103-2 quantitative PCR miRNA overexpression 10.33
18 hsa-mir-105-1 quantitative PCR miRNA downregulation 2.083
19 hsa-mir-105-2 quantitative PCR miRNA downregulation 2.083
20 hsa-mir-106a quantitative PCR miRNA downregulation 5
21 hsa-mir-106b quantitative PCR miRNA overexpression 6.51
22 hsa-mir-107 quantitative PCR miRNA overexpression 16.04
23 hsa-mir-10a quantitative PCR miRNA downregulation 50
24 hsa-mir-10b quantitative PCR miRNA downregulation 50
25 hsa-mir-122 quantitative PCR miRNA downregulation 5
26 hsa-mir-124-1 quantitative PCR miRNA downregulation 1.449
27 hsa-mir-124-2 quantitative PCR miRNA downregulation 1.449
28 hsa-mir-124-3 quantitative PCR miRNA downregulation 1.449
29 hsa-mir-125a quantitative PCR miRNA overexpression 2.59
30 hsa-mir-125b-1 quantitative PCR miRNA downregulation 6.667
31 hsa-mir-125b-2 quantitative PCR miRNA downregulation 7.143
32 hsa-mir-126 quantitative PCR miRNA overexpression 1.29
33 hsa-mir-127 quantitative PCR miRNA overexpression 39.41
34 hsa-mir-128-1 quantitative PCR miRNA overexpression 18.07
35 hsa-mir-128-2 quantitative PCR miRNA overexpression 2.74
36 hsa-mir-129-2 quantitative PCR miRNA overexpression 8.27
37 hsa-mir-130a quantitative PCR miRNA overexpression 9.13
38 hsa-mir-130b quantitative PCR miRNA downregulation 2.632
39 hsa-mir-132 quantitative PCR miRNA downregulation 9.091
40 hsa-mir-133a-1 quantitative PCR miRNA overexpression 3.83
41 hsa-mir-133a-2 quantitative PCR miRNA overexpression 3.83
42 hsa-mir-133b quantitative PCR miRNA overexpression 5.02
43 hsa-mir-134 quantitative PCR miRNA overexpression 6.89
44 hsa-mir-135a-1 quantitative PCR miRNA downregulation 25
45 hsa-mir-135a-2 quantitative PCR miRNA downregulation 25
46 hsa-mir-135b quantitative PCR miRNA downregulation 1.449
47 hsa-mir-136 quantitative PCR miRNA downregulation 10
48 hsa-mir-137 quantitative PCR miRNA downregulation 16.667
49 hsa-mir-138-1 quantitative PCR miRNA downregulation 50
50 hsa-mir-138-2 quantitative PCR miRNA downregulation 50
51 hsa-mir-139 quantitative PCR miRNA overexpression 2.25
52 hsa-mir-141 quantitative PCR miRNA downregulation 14.286
53 hsa-mir-142 quantitative PCR miRNA overexpression 6.99
54 hsa-mir-143 quantitative PCR miRNA downregulation 1.389
55 hsa-mir-144 quantitative PCR miRNA downregulation 33.333
56 hsa-mir-145 quantitative PCR miRNA overexpression 1.04
57 hsa-mir-146a quantitative PCR miRNA downregulation 25
58 hsa-mir-147 quantitative PCR miRNA downregulation 4.348
59 hsa-mir-148a quantitative PCR miRNA downregulation 3.333
60 hsa-mir-148b quantitative PCR miRNA downregulation 1.639
61 hsa-mir-149 quantitative PCR miRNA overexpression 2.85
62 hsa-mir-150 quantitative PCR miRNA downregulation 1.163
63 hsa-mir-151 quantitative PCR miRNA downregulation 8.333
64 hsa-mir-152 quantitative PCR miRNA overexpression 1.33
65 hsa-mir-153-1 quantitative PCR miRNA downregulation 4.167
66 hsa-mir-153-2 quantitative PCR miRNA downregulation 4.167
67 hsa-mir-154 quantitative PCR miRNA downregulation 14.286
68 hsa-mir-155 quantitative PCR miRNA downregulation 50
69 hsa-mir-15a quantitative PCR miRNA overexpression 1.05
70 hsa-mir-15b quantitative PCR miRNA overexpression 2.78
71 hsa-mir-16-1 quantitative PCR miRNA overexpression 1.36
72 hsa-mir-16-2 quantitative PCR miRNA overexpression 5.25
73 hsa-mir-17 quantitative PCR miRNA overexpression 4.33
74 hsa-mir-181a-1 quantitative PCR miRNA downregulation 2.5
75 hsa-mir-181a-2 quantitative PCR miRNA downregulation 2.174
76 hsa-mir-181b-1 quantitative PCR miRNA downregulation 8.333
77 hsa-mir-181b-2 quantitative PCR miRNA downregulation 8.333
78 hsa-mir-181c quantitative PCR miRNA downregulation 2.174
79 hsa-mir-182 quantitative PCR miRNA overexpression 2.33
80 hsa-mir-183 quantitative PCR miRNA downregulation 6.667
81 hsa-mir-184 quantitative PCR miRNA overexpression 3.42
82 hsa-mir-185 quantitative PCR miRNA overexpression 7.93
83 hsa-mir-186 quantitative PCR miRNA overexpression 2.78
84 hsa-mir-187 quantitative PCR miRNA downregulation 1.053
85 hsa-mir-188 quantitative PCR miRNA downregulation 1.493
86 hsa-mir-18a quantitative PCR miRNA overexpression 1.9
87 hsa-mir-190 quantitative PCR miRNA downregulation 5.556
88 hsa-mir-191 quantitative PCR miRNA downregulation 33.333
89 hsa-mir-194-1 quantitative PCR miRNA downregulation 14.286
90 hsa-mir-194-2 quantitative PCR miRNA downregulation 14.286
91 hsa-mir-195 quantitative PCR miRNA overexpression 18.05
92 hsa-mir-196a-1 quantitative PCR miRNA downregulation 1.099
93 hsa-mir-196a-2 quantitative PCR miRNA downregulation 1.613
94 hsa-mir-196b quantitative PCR miRNA overexpression 13.75
95 hsa-mir-197 quantitative PCR miRNA overexpression 24.83
96 hsa-mir-198 quantitative PCR miRNA downregulation 100
97 hsa-mir-199a-1 quantitative PCR miRNA overexpression 11.4
98 hsa-mir-199a-2 quantitative PCR miRNA overexpression 12.78
99 hsa-mir-199b quantitative PCR miRNA overexpression 6.77
100 hsa-mir-19a quantitative PCR miRNA downregulation 2.128
101 hsa-mir-19b-1 quantitative PCR miRNA overexpression 10.69
102 hsa-mir-200a quantitative PCR miRNA overexpression 403.92
103 hsa-mir-200b quantitative PCR miRNA downregulation 3.448
104 hsa-mir-200c quantitative PCR miRNA downregulation 3.704
105 hsa-mir-203 quantitative PCR miRNA downregulation 5.556
106 hsa-mir-204 quantitative PCR miRNA overexpression 3.55
107 hsa-mir-205 quantitative PCR miRNA overexpression 4.06
108 hsa-mir-206 quantitative PCR miRNA downregulation 4.545
109 hsa-mir-208a quantitative PCR miRNA downregulation 4.167
110 hsa-mir-20a quantitative PCR miRNA downregulation 100
111 hsa-mir-21 quantitative PCR miRNA overexpression 46.67
112 hsa-mir-210 quantitative PCR miRNA overexpression 143.5
113 hsa-mir-211 quantitative PCR miRNA overexpression 9.19
114 hsa-mir-212 quantitative PCR miRNA downregulation 1.37
115 hsa-mir-214 quantitative PCR miRNA overexpression 4.95
116 hsa-mir-215 quantitative PCR miRNA downregulation 5.882
117 hsa-mir-216a quantitative PCR miRNA downregulation 1.587
118 hsa-mir-217 quantitative PCR miRNA downregulation 50
119 hsa-mir-218-1 quantitative PCR miRNA overexpression 6.06
120 hsa-mir-218-2 quantitative PCR miRNA overexpression 6.06
121 hsa-mir-219-1 quantitative PCR miRNA overexpression 1.45
122 hsa-mir-219-2 quantitative PCR miRNA overexpression 1.45
123 hsa-mir-22 quantitative PCR miRNA overexpression 1.25
124 hsa-mir-220a quantitative PCR miRNA overexpression 1.01
125 hsa-mir-221 quantitative PCR miRNA downregulation 1.333
126 hsa-mir-222 quantitative PCR miRNA downregulation 1.852
127 hsa-mir-223 quantitative PCR miRNA downregulation 12.5
128 hsa-mir-224 quantitative PCR miRNA downregulation 1.408
129 hsa-mir-23a quantitative PCR miRNA overexpression 3.82
130 hsa-mir-23b quantitative PCR miRNA overexpression 2.61
131 hsa-mir-24-1 quantitative PCR miRNA overexpression 36.52
132 hsa-mir-24-2 quantitative PCR miRNA overexpression 36.52
133 hsa-mir-25 quantitative PCR miRNA downregulation 1.163
134 hsa-mir-26a-1 quantitative PCR miRNA downregulation 2.703
135 hsa-mir-26a-2 quantitative PCR miRNA downregulation 2.703
136 hsa-mir-26b quantitative PCR miRNA overexpression 3.14
137 hsa-mir-27a quantitative PCR miRNA overexpression 2.46
138 hsa-mir-27b quantitative PCR miRNA overexpression 2.46
139 hsa-mir-28 quantitative PCR miRNA downregulation 4.762
140 hsa-mir-296 quantitative PCR miRNA downregulation 2.326
141 hsa-mir-299 quantitative PCR miRNA overexpression 1.98
142 hsa-mir-29a quantitative PCR miRNA overexpression 1.56
143 hsa-mir-29b-1 quantitative PCR miRNA downregulation 2.174
144 hsa-mir-29b-2 quantitative PCR miRNA downregulation 2.174
145 hsa-mir-29c quantitative PCR miRNA overexpression 1.56
146 hsa-mir-301a quantitative PCR miRNA overexpression 3.11
147 hsa-mir-302a quantitative PCR miRNA downregulation 5
148 hsa-mir-302b quantitative PCR miRNA downregulation 3.226
149 hsa-mir-302c quantitative PCR miRNA downregulation 9.091
150 hsa-mir-302d quantitative PCR miRNA downregulation 11.111
151 hsa-mir-30a quantitative PCR miRNA downregulation 5.556
152 hsa-mir-30b quantitative PCR miRNA overexpression 1.67
153 hsa-mir-30c-1 quantitative PCR miRNA overexpression 1.21
154 hsa-mir-30c-2 quantitative PCR miRNA overexpression 1.21
155 hsa-mir-30e quantitative PCR miRNA downregulation 5.556
156 hsa-mir-31 quantitative PCR miRNA overexpression 18.64
157 hsa-mir-32 quantitative PCR miRNA downregulation 12.5
158 hsa-mir-320a quantitative PCR miRNA downregulation 1.37
159 hsa-mir-323 quantitative PCR miRNA downregulation 2.041
160 hsa-mir-324 quantitative PCR miRNA overexpression 1.73
161 hsa-mir-325 quantitative PCR miRNA downregulation 2.703
162 hsa-mir-326 quantitative PCR miRNA downregulation 5.556
163 hsa-mir-328 quantitative PCR miRNA overexpression 4.53
164 hsa-mir-330 quantitative PCR miRNA downregulation 1.176
165 hsa-mir-331 quantitative PCR miRNA downregulation 2.941
166 hsa-mir-335 quantitative PCR miRNA downregulation 100
167 hsa-mir-337 quantitative PCR miRNA overexpression 1.83
168 hsa-mir-338 quantitative PCR miRNA downregulation 1.099
169 hsa-mir-339 quantitative PCR miRNA overexpression 2.53
170 hsa-mir-33a quantitative PCR miRNA downregulation 100
171 hsa-mir-340 quantitative PCR miRNA downregulation 5.263
172 hsa-mir-342 quantitative PCR miRNA downregulation 1.587
173 hsa-mir-345 quantitative PCR miRNA overexpression 5.2
174 hsa-mir-346 quantitative PCR miRNA overexpression 2.6
175 hsa-mir-34a quantitative PCR miRNA overexpression 4.87
176 hsa-mir-34b quantitative PCR miRNA downregulation 4.348
177 hsa-mir-361 quantitative PCR miRNA downregulation 2.222
178 hsa-mir-365-2 quantitative PCR miRNA downregulation 1.149
179 hsa-mir-367 quantitative PCR miRNA downregulation 100
180 hsa-mir-370 quantitative PCR miRNA downregulation 1.235
181 hsa-mir-371 quantitative PCR miRNA overexpression 3.16
182 hsa-mir-372 quantitative PCR miRNA downregulation 8.333
183 hsa-mir-373 quantitative PCR miRNA downregulation 2.381
184 hsa-mir-375 quantitative PCR miRNA downregulation 3.704
185 hsa-mir-376a-1 quantitative PCR miRNA downregulation 5.263
186 hsa-mir-376c quantitative PCR miRNA downregulation 100
187 hsa-mir-377 quantitative PCR miRNA downregulation 4.545
188 hsa-mir-378 quantitative PCR miRNA downregulation 3.704
189 hsa-mir-379 quantitative PCR miRNA downregulation 1.667
190 hsa-mir-380 quantitative PCR miRNA downregulation 100
191 hsa-mir-381 quantitative PCR miRNA downregulation 100
192 hsa-mir-382 quantitative PCR miRNA downregulation 100
193 hsa-mir-383 quantitative PCR miRNA downregulation 9.091
194 hsa-mir-422a quantitative PCR miRNA downregulation 6.667
195 hsa-mir-423 quantitative PCR miRNA downregulation 1.538
196 hsa-mir-424 quantitative PCR miRNA downregulation 16.667
197 hsa-mir-425 quantitative PCR miRNA downregulation 6.667
198 hsa-mir-7-1 quantitative PCR miRNA downregulation 14.286
199 hsa-mir-7-2 quantitative PCR miRNA downregulation 1.562
200 hsa-mir-7-3 quantitative PCR miRNA downregulation 5.556
201 hsa-mir-9-1 quantitative PCR miRNA overexpression 68.05
202 hsa-mir-9-2 quantitative PCR miRNA overexpression 5.52
203 hsa-mir-9-3 quantitative PCR miRNA downregulation 7.143
204 hsa-mir-92a-1 quantitative PCR miRNA downregulation 16.667
205 hsa-mir-92a-2 quantitative PCR miRNA downregulation 2.632
206 hsa-mir-93 quantitative PCR miRNA overexpression 8.13
207 hsa-mir-95 quantitative PCR miRNA downregulation 50
208 hsa-mir-96 quantitative PCR miRNA overexpression 83.35
209 hsa-mir-98 quantitative PCR miRNA overexpression 8.29
210 hsa-mir-99a quantitative PCR miRNA downregulation 4.348
211 hsa-mir-99b quantitative PCR miRNA overexpression 5.1

Detailed information about selected miRNA


hsa-let-7a-1
quantitative PCR
miRNA downregulation
33.333    

Genes associated with selected miRNA


target gene regulation mechanism of regulation comment

Comments


General comment: Real-time expression profiling of microRNA precursors; Annotation data from supplementary table 4. MIR-321 could not be annotated.