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(chrI - chrXVI,chrMito,2-micron)

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  XIV  XV  XVI  Mito
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About CYGD


MIPS Fungal Genomes

mips home MIPS-FUNGI-ADM      FTP
BIM1 Binding to microtubules 
Entry:YER016w
Alias:YEB1
Classification:known protein | 5422 Entries | Evi | PUBMED
Feature Type:CDS
Features
   Blast-Simap    DNA VIEW    PROTEIN VIEW

Similarity:
Paralogs (6.7 %) ;  |  Homologs in   Hemiascomycota (90.4 %);  Basidiomycota (36.6 %);  Fungi (90.4 %);  Eukaryota (90.4 %);  Plants (26 %);  Mammalia (31.1 %);  Human (29.3 %);  Bacteria (16.9 %);  All except yeast (90.4 %)

  • similarity to human EB1 and t-Cell activation protein and mouse APC-binding protein EB1 | PUBMED
Functional Classification:
  • BIOGENESIS OF CELLULAR COMPONENTS
    ..cytoskeleton/structural proteins
    ....microtubule cytoskeleton | 47 Entries | Evi | PUBMED
  • CELL CYCLE AND DNA PROCESSING
    ..cell cycle
    ....mitotic cell cycle and cell cycle control
    ......cell cycle checkpoints (checkpoints of morphogenesis, DNA-damage,-replication, mitotic phase and spindle) | 67 Entries | Evi | PUBMED
  • CELL CYCLE AND DNA PROCESSING
    ..cell cycle
    ....nuclear and chromosomal cycle
    ......nuclear migration | 15 Entries | Evi | PUBMED
InterPro:
Localization:  BIM1 localization details
  • cytoplasm
  • cytoskeleton
  • cytoskeleton
    ..tubulin cytoskeleton
Remarks:
  • the human EB1 protein interacts with the human ABC protein, which is implicated in sporadic and familial forms of colorectal cancer, see | PUBMED
    Phenotypes:  Disruption: BIM1 details
    • viable
    ___
    • deletion of BIM1 results in a strong bilateral karyogamy defect, hypersensitivity to benomyl, and aberrant spindle behavior, all phenotypes associated with mutations affecting microtubules in yeast, and inviability at extreme temperatures (i.e., gt=370C or lt=140C) | PUBMED
    • mutants do proceed to cytokinesis even if daughter cells do not contain a nucleus | PUBMED
    • null mutants grow poorly at 15C | PUBMED
    ___
    • Conditional phenotypes
      ..Heat-sensitivity (ts) | 313 Entries
    • Conditional phenotypes
      ..Cold-sensitivity (cs) | 105 Entries
    • Cell morphology and organelle mutants
      ..Cytoskeleton mutants
      ....Tubulin cytoskeleton mutants
      ......benomyl sensitivity | 33 Entries
    Overexpression:
    • overexpression of BIM1 in wild-type cells is lethal resulting in cell cycle arrest with large budded cells | PUBMED
    Click for larger Map
    Physical Features
    Coordinates:188276 - 189310 (W)
    Length:1035 nt
    Contig:chrV
    Exon Coordinates:188276 - 189310
    GC Content:40.4 %
    Protein Length:344 aa
    Isoelectric Point:5.26
    Molecular Weight:38361.9 Da
    Retrieve Sequence: DNA /Protein
    Literature | References
    CYGD curated Lit.:PubMed
    PubMed:Search abstracts
    PubMed Central:Search full-text articles
    Sequence References:
    EMBL: U18778
    PIR: S50474
    UniProtKB: P40013
    NCBI: NP_010932
    Additional Links:
    LinkOut:
  • SGD - Saccharomyces Genome Database
  • YGOB - Yeast Gene Order Browser
  • yMGV - yeast Microarray Global Viewer

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