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Chromosome
(chrI - chrXVI,chrMito,2-micron)

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  VIII  IX  X  XI  XII  XIII
  XIV  XV  XVI  Mito
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WUBLAST DNA/Protein

About CYGD


MIPS Fungal Genomes
mips home MIPS-FUNGI-ADM      FTP
SWD1 Subunit of the COMPASS complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres 
Entry:YAR003w
Alias:CPS50; SAF49
Classification:known protein | 5422 Entries | Evi | PUBMED
Feature Type:CDS
Features
   Blast-Simap    DNA VIEW    PROTEIN VIEW
Similarity:
Paralogs (16.2 %) ;  |  Homologs in   Hemiascomycota (96.7 %);  Basidiomycota (25.9 %);  Fungi (96.7 %);  Eukaryota (96.7 %);  Plants (28.9 %);  Mammalia (25.2 %);  Human (25.2 %);  Bacteria (12.4 %);  All except yeast (96.7 %)
  • similarity to human RB protein binding protein
Functional Classification:
  • CELL CYCLE AND DNA PROCESSING
    ..DNA processing
    ....DNA restriction or modification
    ......DNA conformation modification (e.g. chromatin) | 187 Entries | Evi | PUBMED
  • TRANSCRIPTION
    ..RNA synthesis
    ....mRNA synthesis
    ......transcriptional control
    ........transcription activation | 42 Entries | Evi | PUBMED
  • PROTEIN FATE (folding, modification, destination)
    ..protein modification
    ....posttranslational modification of amino acids (e.g. hydroxylation, methylation) | 26 Entries | Evi | PUBMED
EC Number:
  • 2.1.1.43: Transferases
    ..Transferring One-Carbon Groups
    ....Methyltransferases
    ......histone-lysine N-methyltransferase | 9 Entries | Evi | PUBMED
InterPro:
Localization:  SWD1 localization details
  • nucleus
Phenotypes:  Disruption: SWD1 details
  • viable
___
  • Exhibits sensitivity at 15 generations when grown in medium of pH 8. | Evi | PUBMED
Click for larger Map
Physical Features
Coordinates:155007 - 156287 (W)
Length:1281 nt
Contig:chrI
Exon Coordinates:155007 - 156287
GC Content:40 %
Protein Length:426 aa
Isoelectric Point:4.68
Molecular Weight:48655.1 Da
Retrieve Sequence: DNA /Protein
Literature | References
CYGD curated Lit.:PubMed
PubMed:Search abstracts
PubMed Central:Search full-text articles
Sequence References:
EMBL: L22015
PIR: S40901
UniProtKB: P39706
NCBI: NP_009403
Additional Links:
LinkOut:
  • SGD - Saccharomyces Genome Database
  • YGOB - Yeast Gene Order Browser
  • yMGV - yeast Microarray Global Viewer
    • To submit new information about this entry, please write to

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