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Chromosome
(chrI - chrXVI,chrMito,2-micron)

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  VIII  IX  X  XI  XII  XIII
  XIV  XV  XVI  Mito
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About CYGD


MIPS Fungal Genomes

mips home MIPS-FUNGI-ADM      FTP
YPR002c-a   INVALID GENE MODELQuestionable protein - identified by SAGE 
Entry:YPR002c-a   Gene model invalid, please see 'Alternate Entry'.
Classification:no similarity |  Entries
Feature Type:CDS
Features
   Blast-Simap    DNA VIEW    PROTEIN VIEW

Similarity:
Paralogs ( %) ;  |  Homologs in   Hemiascomycota ( %);  Basidiomycota ( %);  Fungi ( %);  Eukaryota ( %);  Plants ( %);  Mammalia ( %);  Human ( %);  Bacteria ( %);  All except yeast ( %)

  • strong similarity to other questionable ORFs within or overlapping with remnant or delta-LTR of complete TY1 (YCR018c-a, YLR334c, YOL106w, YDR366c, YER181c, YOL013w-b, YDR034c-a, YGR122c-a, YMR046w-a)
Functional Classification:
TC Class:
  • The unclassifiable, putative or spurios Transporters
    ..The Spurious and Dubious ORFs
    ....The Spurious Associated to Ty Elements | 6 Entries | Evi | PUBMED
Localization: TargetP: Secretory pathway  (RC = 4)
Remarks:
  • identified by SAGE expression analysis | PUBMED
  • gene overlaps with remnant delta-LTR
    Phenotypes:
    Click for larger Map
    Physical Features
    Coordinates:560763 - 560566 (C)
    Length:198 nt
    Contig:chrXVI
    Exon Coordinates:560763 - 560566
    GC Content:32.3 %
    Protein Length:65 aa
    Isoelectric Point:4.57
    Molecular Weight:7227.5 Da
    Retrieve Sequence: DNA /Protein
    Literature | References
    CYGD curated Lit.:PubMed
    PubMed:Search abstracts
    PubMed Central:Search full-text articles
    Sequence References:
    EMBL: Z48951
    Additional Links:
    LinkOut:
  • SGD - Saccharomyces Genome Database
  • YGOB - Yeast Gene Order Browser
  • yMGV - yeast Microarray Global Viewer

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