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(chrI - chrXVI,chrMito,2-micron)

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About CYGD


MIPS Fungal Genomes

mips home MIPS-FUNGI-ADM      FTP
YNR066c Strong similarity to Vacuolar protein sorting/targeting proteins Pep1p, VTH1p and VTH22p 
Entry:YNR066c
Alias:N3543
Classification:strong similarity to known protein | 49 Entries
Feature Type:CDS
Features
   Blast-Simap    DNA VIEW    PROTEIN VIEW

Similarity:
Paralogs (26.6 %) ;  |  Homologs in   Hemiascomycota (38.2 %);  Basidiomycota (12.6 %);  Fungi (38.2 %);  Eukaryota (38.2 %);  Plants (12.8 %);  Mammalia (13.3 %);  Human (11.1 %);  Bacteria (17.5 %);  All except yeast (38.2 %)

  • strong similarity to YJL222w, YIL173w and Pep1p
Functional Classification:
TC Class:
  • Non Transporting Mebrane Proteins
    ..Trafficking
    ....VAC
    ......The Vacuolar Sorting Subfamily | 7 Entries | Evi | PUBMED
InterPro:
Localization:  YNR066c localization details
  • mitochondria
 TargetP: Secretory pathway  (RC = 1)
Remarks:
  • putative pseudogene; 5" part to carboxypeptidase Y-sorting Pep1p
    Phenotypes:  Disruption: YNR066c details
    • viable
    Click for larger Map
    Physical Features
    Coordinates:755035 - 753725 (C)
    Length:1311 nt
    Contig:chrXIV
    Exon Coordinates:755035 - 753725
    GC Content:36.5 %
    Protein Length:436 aa
    Isoelectric Point:4.92
    Molecular Weight:49654.9 Da
    Retrieve Sequence: DNA /Protein
    Literature | References
    CYGD curated Lit.:PubMed
    PubMed:Search abstracts
    PubMed Central:Search full-text articles
    Sequence References:
    EMBL: Z71681
    PIR: S63398
    UniProtKB: P53752
    NCBI: NP_014464
    Additional Links:
    LinkOut:
  • SGD - Saccharomyces Genome Database
  • YGOB - Yeast Gene Order Browser
  • yMGV - yeast Microarray Global Viewer

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