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(chrI - chrXVI,chrMito,2-micron)

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MPact protein interaction

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About CYGD


MIPS Fungal Genomes

mips home MIPS-FUNGI-ADM      FTP
VPS75 Protein involved in vacuolar protein sorting 
Entry:YNL246w
Alias:N0890
Classification:known protein | 5422 Entries | Evi | PUBMED
Feature Type:CDS
Overlapping Feature:
  • YNL245c CWC25 Component of a complex containing Cef1p, involved in pre-mRNA splicing [186886-186347(C) CDS]
Features
   Blast-Simap    DNA VIEW    PROTEIN VIEW

Similarity:
Paralogs (13.2 %) ;  |  Homologs in   Hemiascomycota (79.9 %);  Basidiomycota (26.5 %);  Fungi (79.9 %);  Eukaryota (79.9 %);  Plants (25.3 %);  Mammalia (24 %);  Human (22.2 %);  Bacteria (17.8 %);  All except yeast (79.9 %)

  • similarity to D.melanogaster SET protein
Functional Classification:
  • CELLULAR TRANSPORT, TRANSPORT FACILITIES AND TRANSPORT ROUTES
    ..transport routes
    ....vacuolar/lysosomal transport | 154 Entries | Evi | PUBMED
  • PROTEIN FATE (folding, modification, destination)
    ..protein targeting, sorting and translocation | 280 Entries | Evi | PUBMED
  • CELL CYCLE AND DNA PROCESSING
    ..cell cycle
    ....mitotic cell cycle and cell cycle control | 447 Entries | Evi
InterPro:
Localization:  VPS75 localization details
  • nucleus
Remarks:
  • members of the NAP/SET family of proteins interact specifically with B-type cyclins
    Phenotypes:  Disruption: VPS75 details
    • viable
    Click for larger Map
    Physical Features
    Coordinates:185461 - 186350 (W)
    Length:890 nt
    Contig:chrXIV
    Exon Coordinates:185461 - 185492 | Evi | PUBMED
    185588 - 186350 | Evi | PUBMED
    GC Content:44.3 %
    Protein Length:264 aa
    Isoelectric Point:4.64
    Molecular Weight:30615.1 Da
    Retrieve Sequence: DNA /Protein
    Literature | References
    CYGD curated Lit.:PubMed
    PubMed:Search abstracts
    PubMed Central:Search full-text articles
    Sequence References:
    EMBL: Z71522
    PIR: S63214
    UniProtKB: P53853
    NCBI: NP_014153
    Additional Links:
    LinkOut:
  • SGD - Saccharomyces Genome Database
  • YGOB - Yeast Gene Order Browser
  • yMGV - yeast Microarray Global Viewer

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