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(chrI - chrXVI,chrMito,2-micron)

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About CYGD


MIPS Fungal Genomes

mips home MIPS-FUNGI-ADM      FTP
FRE1 Ferric (and cupric) reductase 
Entry:YLR214w
Alias:L8167.2
Classification:known protein | 5422 Entries | Evi | PUBMED
Feature Type:CDS
Features
   Blast-Simap    DNA VIEW    PROTEIN VIEW

Similarity:
Paralogs (25.6 %) ;  |  Homologs in   Hemiascomycota (92.9 %);  Basidiomycota (22.9 %);  Fungi (92.9 %);  Eukaryota (92.9 %);  Plants (12.9 %);  Mammalia (14.2 %);  Human (13 %);  Bacteria (15.2 %);  All except yeast (92.9 %)

  • similarity to YOR384w, Fre2p, YOR381w, YNR060w, YLL051c and YOL152w
  • Fre1p is a cytochrome b similar to that of NADPH oxidase
  • similarity to large beta subunit of human NADPH oxidase
  • has some similarity to human cytochrome b558
Functional Classification:
  • INTERACTION WITH THE ENVIRONMENT
    ..homeostasis
    ....homeostasis of cations
    ......homeostasis of metal ions (Na, K, Ca etc.) | 98 Entries | Evi | PUBMED
  • CELLULAR TRANSPORT, TRANSPORT FACILITIES AND TRANSPORT ROUTES
    ..transport routes
    ....cellular import | 150 Entries | Evi | PUBMED
  • CELLULAR TRANSPORT, TRANSPORT FACILITIES AND TRANSPORT ROUTES
    ..transported compounds (substrates)
    ....ion transport
    ......cation transport (H+, Na+, K+, Ca2+ , NH4+, etc.)
    ........heavy metal ion transport (Cu+, Fe3+, etc.) | 53 Entries | Evi | PUBMED
EC Number:
  • 1.16.1.7: Oxidoreductases
    ..Oxidizing metal ions
    ....With NAD+ or NADP+ as acceptor
    ......ferric-chelate reductase | 7 Entries | Evi | PUBMED
Cofactor:
  • heme
TC Class:
  • Non Transporting Mebrane Proteins
    ..Oxidoreductases
    ....Iron Reductases
    ......The Iron Reductase Type 1 Subfamily | 6 Entries | Evi | PUBMED
InterPro:
Localization:  FRE1 localization details
  • plasma membrane
  • cytoplasm
  • ER
 TargetP: Secretory pathway  (RC = 1)
Remarks:
  • Fre1p and Fre2p are rate-limiting for growth on ferric iron
  • induction by iron deprivation
  • contains a HPFTXXS motif which is believed to function in FAD binding
  • contains a gly-rich motif and cys/gly couplet which seems to be involved in NADPH binding
  • contains a bis-heme motif (his-294/his-308 and his-364/his-378)
Phenotypes:  Disruption: FRE1 details
  • viable
___
  • mutant is sensitive to iron-deprivation and lacks uptake of ferric iron
  • null mutant is normal for uptake of ferrous iron
  • point mutation in single his-294,his-308,his-364 and his-378 positions show very low heme binding and enzymatic activity
Click for larger Map
Physical Features
Coordinates:568569 - 570629 (W)
Length:2061 nt
Contig:chrXII
Exon Coordinates:568569 - 570629
GC Content:37 %
Protein Length:686 aa
Isoelectric Point:9.28
Molecular Weight:78854.2 Da
Mature Protein:23-686
Transmembrane Domains:Begin - End / Length (aa)
7 - 29 / 23
147 - 169 / 23
214 - 236 / 23
260 - 279 / 20
292 - 314 / 23
329 - 346 / 18
367 - 389 / 23

7 TM- Domains
Retrieve Sequence: DNA /Protein
Literature | References
CYGD curated Lit.:PubMed
PubMed:Search abstracts
PubMed Central:Search full-text articles
Sequence References:
EMBL: U14913
PIR: S30075
UniProtKB: P32791
NCBI: NP_013315
Additional Links:
LinkOut:
  • SGD - Saccharomyces Genome Database
  • YGOB - Yeast Gene Order Browser
  • yMGV - yeast Microarray Global Viewer

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