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Chromosome
(chrI - chrXVI,chrMito,2-micron)

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  XIV  XV  XVI  Mito
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About CYGD


MIPS Fungal Genomes
mips home MIPS-FUNGI-ADM      FTP
PML1 Subunit of the RES complex, which is required for nuclear retention of unspliced pre-mRNAs 
Entry:YLR016c
Alias:L1591
Classification:known protein | 5422 Entries | Evi | PUBMED
Feature Type:CDS
Features
   Blast-Simap    DNA VIEW    PROTEIN VIEW
Similarity:
Paralogs (10.3 %) ;  |  Homologs in   Hemiascomycota (88.2 %);  Basidiomycota (24 %);  Fungi (88.2 %);  Eukaryota (88.2 %);  Plants (28.9 %);  Mammalia (13.8 %);  Human (13.4 %);  Bacteria (20.2 %);  All except yeast (88.2 %)
  • weak similarity to TRCDSEMBLNEW:AK022615_1 unnamed ORF; Homo sapiens cDNA FLJ12553 fis, clone NT2RM4000733, weakly similar to TRANSCRIPTION TERMINATION FACTOR RHO
Functional Classification:
  • CELLULAR TRANSPORT, TRANSPORT FACILITIES AND TRANSPORT ROUTES
    ..transported compounds (substrates)
    ....RNA transport | 86 Entries | Evi | PUBMED
  • CELLULAR TRANSPORT, TRANSPORT FACILITIES AND TRANSPORT ROUTES
    ..transport routes
    ....nuclear transport | 85 Entries | Evi | PUBMED
  • TRANSCRIPTION
    ..RNA processing
    ....mRNA processing (splicing, 5'-, 3'-end processing)
    ......splicing | 141 Entries | Evi | PUBMED
InterPro:
Localization:  PML1 localization details
  • cytoplasm
  • nucleus
Phenotypes:  Disruption: PML1 details
  • viable
Click for larger Map
Physical Features
Coordinates:177415 - 176801 (C)
Length:615 nt
Contig:chrXII
Exon Coordinates:177415 - 176801
GC Content:42.4 %
Protein Length:204 aa
Isoelectric Point:5.09
Molecular Weight:23653.7 Da
Retrieve Sequence: DNA /Protein
Literature | References
CYGD curated Lit.:PubMed
PubMed:Search abstracts
PubMed Central:Search full-text articles
Sequence References:
EMBL: Z73188
EMBL: X90564
PIR: S64838
UniProtKB: Q07930
NCBI: NP_013116
Additional Links:
LinkOut:
  • SGD - Saccharomyces Genome Database
  • YGOB - Yeast Gene Order Browser
  • yMGV - yeast Microarray Global Viewer
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