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(chrI - chrXVI,chrMito,2-micron)

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About CYGD


MIPS Fungal Genomes
mips home MIPS-FUNGI-ADM      FTP
PPR1 Transcription factor regulating pyrimidine pathway 
Entry:YLR014c
Alias:L1575
Classification:known protein | 5422 Entries
Feature Type:CDS
Features
   Blast-Simap    DNA VIEW    PROTEIN VIEW
Similarity:
Paralogs (20.6 %) ;  |  Homologs in   Hemiascomycota (88.8 %);  Basidiomycota (19.7 %);  Fungi (88.8 %);  Eukaryota (88.8 %);  Plants (8.6 %);  Mammalia (9.9 %);  Human (10.4 %);  Bacteria (8.9 %);  All except yeast (88.8 %)
  • similarity to Stb5p and E.nidulans specific regulator of the purine utilization pathway UaY
  • member of the binuclear zinc cluster protein family
Functional Classification:
  • METABOLISM
    ..nucleotide/nucleoside/nucleobase metabolism
    ....pyrimidine nucleotide/nucleoside/nucleobase metabolism
    ......pyrimidine nucleotide/nucleoside/nucleobase anabolism | 14 Entries | Evi | PUBMED
  • METABOLISM
    ..nucleotide/nucleoside/nucleobase metabolism
    ....regulation of nucleotide/nucleoside/nucleobase metabolism | 12 Entries | Evi
Pathway:
  • pyrimidine pathway
InterPro:
Localization:  PPR1 localization details
  • nucleus
Remarks:
    • ZN[2]-CYS[6] fungal-type binuclear cluster domain in the N-terminal region
    • predicted GAL4-like DNA-binding domain
    • DNA binding is conferred through amino acids 34-75
Phenotypes:  Disruption: PPR1 details
  • viable
Click for larger Map
Physical Features
Coordinates:174981 - 172267 (C)
Length:2715 nt
Contig:chrXII
Exon Coordinates:174981 - 172267
GC Content:38.6 %
Protein Length:904 aa
Isoelectric Point:7.12
Molecular Weight:102724 Da
Retrieve Sequence: DNA /Protein
Literature | References
CYGD curated Lit.:PubMed
PubMed:Search abstracts
PubMed Central:Search full-text articles
Sequence References:
EMBL: Z73186
EMBL: X01739
PIR: S05877
UniProtKB: P07272
NCBI: NP_013114
Additional Links:
LinkOut:
  • SGD - Saccharomyces Genome Database
  • YGOB - Yeast Gene Order Browser
  • yMGV - yeast Microarray Global Viewer
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