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Chromosome
(chrI - chrXVI,chrMito,2-micron)

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  VIII  IX  X  XI  XII  XIII
  XIV  XV  XVI  Mito
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About CYGD


MIPS Fungal Genomes

mips home MIPS-FUNGI-ADM      FTP
SET3 SET3 complex includes two histone deacetylases, Hos2 and Hst1, and is a meiotic-specific repressor of the sporulation gene program 
Entry:YKR029c
Alias:SET3
Classification:known protein | 5422 Entries | Evi | PUBMED
Feature Type:CDS
Features
   Blast-Simap    DNA VIEW    PROTEIN VIEW

Similarity:
Paralogs (22 %) ;  |  Homologs in   Hemiascomycota (69.6 %);  Basidiomycota (14.9 %);  Fungi (69.6 %);  Eukaryota (69.6 %);  Plants (8.2 %);  Mammalia (14.4 %);  Human (10.8 %);  Bacteria (14.4 %);  All except yeast (69.6 %)

  • similarity to YJL105w, S.pombe hypothetical protein and Lentinula MFBA protein
Functional Classification:
  • CELL CYCLE AND DNA PROCESSING
    ..DNA processing
    ....DNA restriction or modification
    ......DNA conformation modification (e.g. chromatin) | 187 Entries | Evi | PUBMED
  • PROTEIN FATE (folding, modification, destination)
    ..protein modification
    ....modification by acetylation, deacetylation | 69 Entries | Evi | PUBMED
InterPro:
Localization:  SET3 localization details
  • nucleus
Remarks:
    • contains a PHD finger
Phenotypes:  Disruption: SET3 details
  • viable
Click for larger Map
Physical Features
Coordinates:499475 - 497220 (C)
Length:2256 nt
Contig:chrXI
Exon Coordinates:499475 - 497220
GC Content:36.3 %
Protein Length:751 aa
Isoelectric Point:8.9
Molecular Weight:85480.3 Da
Retrieve Sequence: DNA /Protein
Literature | References
CYGD curated Lit.:PubMed
PubMed:Search abstracts
PubMed Central:Search full-text articles
Sequence References:
EMBL: Z28254
PIR: S38101
UniProtKB: P36124
NCBI: NP_012954
Additional Links:
CYGD Tables:
  • Transcriptional map of chromosome XI
  • LinkOut:
  • SGD - Saccharomyces Genome Database
  • YGOB - Yeast Gene Order Browser
  • yMGV - yeast Microarray Global Viewer

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