GSFLogo GSF

 

 mipsLogo mips
GenRE

Navigation: » CYGD » Gene Report

Search ORF/Gene/Description

Chromosome
(chrI - chrXVI,chrMito,2-micron)

Catalogs:
Chromosome View
  I  II  III  IV  V  VI  VII
  VIII  IX  X  XI  XII  XIII
  XIV  XV  XVI  Mito
Other

Search / View

   Advanced Search

   Index Search

MPact protein interaction

Tables, Lists and Reviews

WUBLAST DNA/Protein

About CYGD


MIPS Fungal Genomes
mips home MIPS-FUNGI-ADM      FTP
PRM10 Pheromone-regulated protein 
Entry:YJL108c
Alias:E383; J0811
Classification:known protein | 5422 Entries | Evi | PUBMED
Feature Type:CDS
Overlapping Feature:
  • YJL107c Protein of unknown function [220012-218849(C) CDS]
Features
   Blast-Simap    DNA VIEW    PROTEIN VIEW
Similarity:
Paralogs (16.8 %) ;  |  Homologs in   Hemiascomycota (63.1 %);  Basidiomycota (34.6 %);  Fungi (63.1 %);  Eukaryota (63.1 %);  Plants (18.3 %);  Mammalia (18.5 %);  Human (18.5 %);  Bacteria (22.1 %);  All except yeast (63.1 %)
  • strong similarity to hypothetical S. pombe protein SPAC7D4.12c
Functional Classification:
TC Class:
  • The unclassifiable, putative or spurios Transporters
    ..The Putative Uncharacterized Transporters
    ....The Singletons
    ......The Singletons, nuclear DNA | 105 Entries | Evi | PUBMED
InterPro:
Remarks:
  • protein of unknown function regulated by pheromone
    Phenotypes:  Disruption: PRM10 details
    • viable
    Click for larger Map
    Physical Features
    Coordinates:218852 - 217701 (C)
    Length:1152 nt
    Contig:chrX
    Exon Coordinates:218852 - 217701
    GC Content:40.9 %
    Protein Length:383 aa
    Isoelectric Point:8.3
    Molecular Weight:41488.8 Da
    Transmembrane Domains:Begin - End / Length (aa)
    62 - 84 / 23
    88 - 107 / 20
    114 - 136 / 23
    146 - 168 / 23
    181 - 203 / 23
    218 - 238 / 21
    245 - 262 / 18
    272 - 289 / 18
    294 - 313 / 20
    351 - 373 / 23
    10 TM- Domains
    Retrieve Sequence: DNA /Protein
    Literature | References
    CYGD curated Lit.:PubMed
    PubMed:Search abstracts
    PubMed Central:Search full-text articles
    Sequence References:
    EMBL: Z49383
    PIR: S53379
    UniProtKB: P42946
    NCBI: NP_012427
    Additional Links:
    CYGD Tables:
  • Classification of the Major Facilitator Superfamily
    • LinkOut:
  • SGD - Saccharomyces Genome Database
  • YGOB - Yeast Gene Order Browser
  • yMGV - yeast Microarray Global Viewer
    • To submit new information about this entry, please write to

    © 2003 GSF - Forschungszentrum für Umwelt und Gesundheit, GmbH Ingolstädter Landstraße 1, D-85764 Neuherberg

    Imprint

    Disclaimer:
    MIPS Databases and associated information are protected by copyright. This server and its associated data and services are for academic, non-commercial use only. The GSF has no liability for the use of results, data or information which have been provided through this server. Neither the use for commercial purposes, nor the redistribution of MIPS database files to third parties nor the distribution of parts of files or derivative products to any third parties is permitted. Commercial users may contact the distributor Biomax Informatics AG.