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(chrI - chrXVI,chrMito,2-micron)

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About CYGD


MIPS Fungal Genomes

mips home MIPS-FUNGI-ADM      FTP
ORC6 Origin recognition complex, 50 KD subunit 
Entry:YHR118c
Alias:(AAP1)
Classification:known protein | 5422 Entries | Evi | PUBMED
Feature Type:CDS
Features
   Blast-Simap    DNA VIEW    PROTEIN VIEW

Similarity:
Paralogs (11.2 %) ;  |  Homologs in   Hemiascomycota (83.2 %);  Basidiomycota (12.4 %);  Fungi (83.2 %);  Eukaryota (83.2 %);  Plants (13.6 %);  Mammalia (9.3 %);  Human (11.7 %);  Bacteria (13.3 %);  All except yeast (83.2 %)

    Functional Classification:
    • INTERACTION WITH THE ENVIRONMENT
      ..cellular sensing and response to external stimulus
      ....chemoperception and response
      ......pheromone response, mating-type determination, sex-specific proteins | 189 Entries | Evi
    • CELL CYCLE AND DNA PROCESSING
      ..DNA processing
      ....DNA synthesis and replication
      ......ori recognition and priming complex formation | 25 Entries | Evi | PUBMED
    • CELL CYCLE AND DNA PROCESSING
      ..DNA processing
      ....DNA restriction or modification
      ......DNA conformation modification (e.g. chromatin) | 187 Entries | Evi | PUBMED
    • TRANSCRIPTION
      ..RNA synthesis
      ....mRNA synthesis
      ......transcriptional control | 495 Entries | Evi
    InterPro:
    Localization:  ORC6 localization details
    • cytoplasm
    • nucleus
    Remarks:
    • phosphorylated when cells enter S-phase | PUBMED
      Phenotypes:  Disruption: ORC6 details
      • lethal
      ___
      • mutants arrest without initiating replication
      • mutants defective in minichromosome maintenance in ARS-specific manner
      • no phosphorylated Cdc6p detected in cells with mutation of all potential Cdc28 phopshorylation sites | PUBMED
      ___
      • Nucleic acid metabolism defects
        ..DNA replication mutants
        ....other DNA replication mutants | 19 Entries
      Overexpression:
      • overproduction exacerbates the phenotypes of cdc6 and cdc46 mutations
      • overproduction causes synthetic dosage lethality in combination with recplication mutants cdc2-1, cdc6-1, cdc14-1, cdc16-1, and cdc46-1
      • overproduction causes synthetic slow growth phenotype in ctf19-26 at 37C
      • overproduction causes synthetic slow growth phenotype in cdc23-1 at 25C
      • overproduction causes synthetic slow growth phenotype in cdc27-1 at 30C
      Click for larger Map
      Physical Features
      Coordinates:345631 - 344324 (C)
      Length:1308 nt
      Contig:chrVIII
      Exon Coordinates:345631 - 344324
      GC Content:37.8 %
      Protein Length:435 aa
      Isoelectric Point:8.16
      Molecular Weight:50295.8 Da
      Retrieve Sequence: DNA /Protein
      Literature | References
      CYGD curated Lit.:PubMed
      PubMed:Search abstracts
      PubMed Central:Search full-text articles
      Sequence References:
      EMBL: U00059
      PIR: A49387
      UniProtKB: P38826
      NCBI: NP_011986
      Additional Links:
      CYGD Pathways:
    • Model of DNA replication complexes during the cell cycle
    • LinkOut:
    • SGD - Saccharomyces Genome Database
    • YGOB - Yeast Gene Order Browser
    • yMGV - yeast Microarray Global Viewer

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