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(chrI - chrXVI,chrMito,2-micron)

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  VIII  IX  X  XI  XII  XIII
  XIV  XV  XVI  Mito
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About CYGD


MIPS Fungal Genomes

mips home MIPS-FUNGI-ADM      FTP
RPH1 Transcriptional repressor of PHR1 
Entry:YER169w
Classification:known protein | 5422 Entries | Evi | PUBMED
Feature Type:CDS
Features
   Blast-Simap    DNA VIEW    PROTEIN VIEW

Similarity:
Paralogs (35.6 %) ;  |  Homologs in   Hemiascomycota (95 %);  Basidiomycota (20.6 %);  Fungi (95 %);  Eukaryota (95 %);  Plants (19.4 %);  Mammalia (20.4 %);  Human (18.1 %);  Bacteria (11.7 %);  All except yeast (95 %)

  • similarity to human retinoblastoma binding protein 2, YDR096w and mouse Smcx protein
Functional Classification:
  • CELL CYCLE AND DNA PROCESSING
    ..DNA processing
    ....DNA recombination and DNA repair
    ......DNA repair | 159 Entries | Evi | PUBMED
  • TRANSCRIPTION
    ..RNA synthesis
    ....mRNA synthesis
    ......transcriptional control
    ........transcription repression | 28 Entries | Evi | PUBMED
InterPro:
Localization:  RPH1 localization details
  • nucleus
Remarks:
  • regulator of PHR1
  • C2H2-type zinc-finger domain (aa position 738) | PUBMED
Phenotypes:  Disruption: RPH1 details
  • viable
Click for larger Map
Physical Features
Coordinates:523364 - 525754 (W)
Length:2391 nt
Contig:chrV
Exon Coordinates:523364 - 525754
GC Content:40.7 %
Protein Length:796 aa
Isoelectric Point:9.17
Molecular Weight:90211.8 Da
Retrieve Sequence: DNA /Protein
Literature | References
CYGD curated Lit.:PubMed
PubMed:Search abstracts
PubMed Central:Search full-text articles
Sequence References:
EMBL: U18922
PIR: S50672
UniProtKB: P39956
NCBI: NP_011096
Additional Links:
CYGD Tables:
  • Yeast C2H2 zinc finger proteins
  • LinkOut:
  • SGD - Saccharomyces Genome Database
  • YGOB - Yeast Gene Order Browser
  • yMGV - yeast Microarray Global Viewer

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