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(chrI - chrXVI,chrMito,2-micron)

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WUBLAST DNA/Protein

About CYGD


MIPS Fungal Genomes

mips home MIPS-FUNGI-ADM      FTP
UBP3 Ubiquitin-specific proteinase 
Entry:YER151c
Classification:known protein | 5422 Entries | Evi | PUBMED
Feature Type:CDS
Features
   Blast-Simap    DNA VIEW    PROTEIN VIEW

Similarity:
Paralogs (17 %) ;  |  Homologs in   Hemiascomycota (80.6 %);  Basidiomycota (24.8 %);  Fungi (80.6 %);  Eukaryota (80.6 %);  Plants (18.1 %);  Mammalia (18 %);  Human (18 %);  Bacteria (14.9 %);  All except yeast (80.6 %)

  • similarity to human KIAA0190 protein, weak similarity to Ubp5p
Functional Classification:
  • PROTEIN FATE (folding, modification, destination)
    ..protein modification
    ....modification by ubiquitination, deubiquitination | 79 Entries | Evi | PUBMED
  • TRANSCRIPTION
    ..RNA synthesis
    ....mRNA synthesis
    ......transcriptional control | 495 Entries | Evi
  • PROTEIN FATE (folding, modification, destination)
    ..protein/peptide degradation
    ....cytoplasmic and nuclear protein degradation | 188 Entries | Evi | PUBMED
EC Number:
  • 3.1.2.15: Hydrolases
    ..Acting on Ester Bonds
    ....Thioester Hydrolases
    ......ubiquitin thiolesterase | 17 Entries
InterPro:
Localization:  UBP3 localization details
  • cytoplasm
Phenotypes:  Disruption: UBP3 details
  • viable
___
  • deletion results in improved silencing of genes near a telomere or at one of the silent mating type loci
  • Exhibits sensitivity at 5 generations when grown in medium of pH 8. | Evi | PUBMED
___
  • Nucleic acid metabolism defects
    ..Transcriptional mutants
    ....Silencing mutants | 26 Entries
Click for larger Map
Physical Features
Coordinates:472419 - 469681 (C)
Length:2739 nt
Contig:chrV
Exon Coordinates:472419 - 469681
GC Content:39.8 %
Protein Length:912 aa
Isoelectric Point:7.66
Molecular Weight:101917 Da
Retrieve Sequence: DNA /Protein
Literature | References
CYGD curated Lit.:PubMed
PubMed:Search abstracts
PubMed Central:Search full-text articles
Sequence References:
EMBL: M94917
EMBL: U18917
PIR: B44450
UniProtKB: Q01477
NCBI: NP_011078
Additional Links:
LinkOut:
  • SGD - Saccharomyces Genome Database
  • YGOB - Yeast Gene Order Browser
  • yMGV - yeast Microarray Global Viewer

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