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(chrI - chrXVI,chrMito,2-micron)

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About CYGD


MIPS Fungal Genomes

mips home MIPS-FUNGI-ADM      FTP
NUP157 Nuclear pore protein 
Entry:YER105c
Classification:known protein | 5422 Entries | Evi | PUBMED
Feature Type:CDS
Features
   Blast-Simap    DNA VIEW    PROTEIN VIEW

Similarity:
Paralogs (41.3 %) ;  |  Homologs in   Hemiascomycota (86 %);  Basidiomycota (21.6 %);  Fungi (86 %);  Eukaryota (86 %);  Plants (19.5 %);  Mammalia (22.3 %);  Human (20.8 %);  Bacteria (8.7 %);  All except yeast (86 %)

  • similarity to Nup170p and rat nucleoporin 155
Functional Classification:
  • CELLULAR TRANSPORT, TRANSPORT FACILITIES AND TRANSPORT ROUTES
    ..transport routes
    ....nuclear transport | 85 Entries | Evi | PUBMED
  • PROTEIN WITH BINDING FUNCTION OR COFACTOR REQUIREMENT (structural or catalytic)
    ..structural protein binding | 56 Entries | Evi | PUBMED
  • PROTEIN FATE (folding, modification, destination)
    ..protein targeting, sorting and translocation | 280 Entries | Evi | PUBMED
  • CELLULAR TRANSPORT, TRANSPORT FACILITIES AND TRANSPORT ROUTES
    ..transported compounds (substrates)
    ....RNA transport | 86 Entries | Evi | PUBMED
  • CELLULAR TRANSPORT, TRANSPORT FACILITIES AND TRANSPORT ROUTES
    ..transported compounds (substrates)
    ....protein transport | 140 Entries | Evi | PUBMED
TC Class:
  • The unclassifiable, putative or spurios Transporters
    ..The Transporters of Unknown Classification
    ....The Nuclear Pore Complex (NPC) Family
    ......The Nuclear Pore Complex (NPC-1) Subfamily Type X1 | 29 Entries | Evi | PUBMED
InterPro:
Localization:  NUP157 localization details
  • nucleus
  • nucleus
    ..nuclear periphery
  • nucleus
    ..nuclear pore
Remarks:
    • lacks peptide repeat elements
    • shares a motif GVRLYF with Nup170p and mammalian Nup155p
Phenotypes:  Disruption: NUP157 details
  • viable
___
  • null mutant has synthetic phenotypes with srp1 mutations, but not lethality
Click for larger Map
Physical Features
Coordinates:372009 - 367834 (C)
Length:4176 nt
Contig:chrV
Exon Coordinates:372009 - 367834
GC Content:37 %
Protein Length:1391 aa
Isoelectric Point:6.04
Molecular Weight:156650 Da
Retrieve Sequence: DNA /Protein
Literature | References
CYGD curated Lit.:PubMed
PubMed:Search abstracts
PubMed Central:Search full-text articles
Sequence References:
EMBL: U18839
PIR: S50608
UniProtKB: P40064
NCBI: NP_011031
Additional Links:
LinkOut:
  • SGD - Saccharomyces Genome Database
  • YGOB - Yeast Gene Order Browser
  • yMGV - yeast Microarray Global Viewer

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