GSFLogo GSF

 

mipsLogo mips
GenRE
Search ORF/Gene/Description

Chromosome
(chrI - chrXVI,chrMito,2-micron)

Catalogs:
Chromosome View
  I  II  III  IV  V  VI  VII
  VIII  IX  X  XI  XII  XIII
  XIV  XV  XVI  Mito
Other

Search / View

   Advanced Search

   Index Search

MPact protein interaction

Tables, Lists and Reviews

WUBLAST DNA/Protein

About CYGD


MIPS Fungal Genomes

mips home MIPS-FUNGI-ADM      FTP
PDS1 Cell cycle regulator 
Entry:YDR113c
Alias:LOC6; YD9727.08
Classification:known protein | 5422 Entries
Feature Type:CDS
Features
   Blast-Simap    DNA VIEW    PROTEIN VIEW

Similarity:
Paralogs (15.9 %) ;  |  Homologs in   Hemiascomycota (83.2 %);  Basidiomycota (11.8 %);  Fungi (83.2 %);  Eukaryota (83.2 %);  Plants (14.6 %);  Mammalia (16.3 %);  Human (15.3 %);  Bacteria (18.7 %);  All except yeast (83.2 %)

  • weak similarity to Streptococcus M protein
Functional Classification:
  • CELLULAR TRANSPORT, TRANSPORT FACILITIES AND TRANSPORT ROUTES
    ..transport routes
    ....nuclear transport | 85 Entries | Evi | PUBMED
  • CELL CYCLE AND DNA PROCESSING
    ..cell cycle
    ....mitotic cell cycle and cell cycle control
    ......cell cycle checkpoints (checkpoints of morphogenesis, DNA-damage,-replication, mitotic phase and spindle) | 67 Entries | Evi
  • PROTEIN FATE (folding, modification, destination)
    ..protein targeting, sorting and translocation | 280 Entries | Evi | PUBMED
  • PROTEIN WITH BINDING FUNCTION OR COFACTOR REQUIREMENT (structural or catalytic)
    ..protein binding | 392 Entries | Evi | PUBMED
Localization:  PDS1 localization details
  • nucleus
Remarks:
  • degraded at the time of anaphase initiation
  • nondegradable derivatives inhibit the onset of anaphase
  • directly ubiquitinated by Xenopus APC
  • not needed during anaphase
  • must act before or during S-phase, probably during spindle formation
  • checkpoint effect is only for chromosome separation and spindle elongation, not for DNA replication, budding or cytokinesis
  • cdc20-3 mutant fail to degrades Pds1p and Clb2p and impairs separation of sister chromatides | PUBMED
  • has bipartite structure with pI of 11.1 for amino acids 1-175 and pI of 3.9 for amino acids 176-343
  • has a putative cyclin destruction box RLPLAAkN at amino acids 85-93
  • overproduced protein is stable in S/G2/M but unstable in G1
  • protein content peaks at M phase and is degraded in early G1
Phenotypes:  Disruption: PDS1 details
  • lethal
___
  • null mutant has a high rate of chromosome loss and is lethal at 36 deg
  • in null mutant at 36 deg, spindle fails to elongate and spindle pole bodies tend to stay in same cell
  • mutant does not have cell cycle arrest at 37 deg
  • pds1-1 mutants exhibit frequent cell death and have a 300-fold increase in chromosome loss
  • pds1-1 mutants are unable to elongate their spindles during anaphase at 37 deg
  • cell cycle progression of mutant cells is uncoupled from the completion of anaphase
  • pds1 deletion mutant does not induce early separation of sister chromatids under normal conditions | PUBMED
  • rsi1-8 pds1 delta can overcome the abaphase block of rsi1 mutants, but arrest then in telophase | PUBMED
___
  • Conditional phenotypes
    ..Heat-sensitivity (ts) | 313 Entries
Click for larger Map
Physical Features
Coordinates:681614 - 680493 (C)
Length:1122 nt
Contig:chrIV
Exon Coordinates:681614 - 680493
GC Content:40.5 %
Protein Length:373 aa
Isoelectric Point:4.86
Molecular Weight:41838.3 Da
Retrieve Sequence: DNA /Protein
Literature | References
CYGD curated Lit.:PubMed
PubMed:Search abstracts
PubMed Central:Search full-text articles
Sequence References:
EMBL: U12185
EMBL: Z48758
PIR: S47911
UniProtKB: P40316
NCBI: NP_010398
Additional Links:
CYGD Pathways:
  • Proteolytic paths involved in cell cycle control
  • DNA Damage Checkpoint
  • LinkOut:
  • SGD - Saccharomyces Genome Database
  • YGOB - Yeast Gene Order Browser
  • yMGV - yeast Microarray Global Viewer

  • To submit new information about this entry, please write to

    © 2003 GSF - Forschungszentrum für Umwelt und Gesundheit, GmbH Ingolstädter Landstraße 1, D-85764 Neuherberg

    Imprint

    Disclaimer:
    MIPS Databases and associated information are protected by copyright. This server and its associated data and services are for academic, non-commercial use only. The GSF has no liability for the use of results, data or information which have been provided through this server. Neither the use for commercial purposes, nor the redistribution of MIPS database files to third parties nor the distribution of parts of files or derivative products to any third parties is permitted. Commercial users may contact the distributor Biomax Informatics AG.