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(chrI - chrXVI,chrMito,2-micron)

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About CYGD


MIPS Fungal Genomes

mips home MIPS-FUNGI-ADM      FTP
TRM7 2-O-ribose tRNA anticodon loop methyltransferase 
Entry:YBR061c
Alias:YR0527
Classification:known protein | 5422 Entries | Evi | PUBMED
Feature Type:CDS
Features
   Blast-Simap    DNA VIEW    PROTEIN VIEW

Similarity:
Paralogs (12.8 %) ;  |  Homologs in   Hemiascomycota (97.4 %);  Basidiomycota (35.2 %);  Fungi (97.4 %);  Eukaryota (97.4 %);  Plants (50.6 %);  Mammalia (52 %);  Human (46.2 %);  Bacteria (25.8 %);  All except yeast (97.4 %)

  • strong similarity to C.elegans cosmid R74.7 protein
  • similarity to E.coli ftsJ protein
  • similarity to YCL054w
Functional Classification:
InterPro:
Localization:  TRM7 localization details
  • cytoplasm
Phenotypes:  Disruption: TRM7 details
  • viable
Click for larger Map
Physical Features
Coordinates:365717 - 364785 (C)
Length:933 nt
Contig:chrII
Exon Coordinates:365717 - 364785
GC Content:40.4 %
Protein Length:310 aa
Isoelectric Point:8.03
Molecular Weight:34700.7 Da
Retrieve Sequence: DNA /Protein
Literature | References
CYGD curated Lit.:PubMed
PubMed:Search abstracts
PubMed Central:Search full-text articles
Sequence References:
EMBL: Z35930
PIR: S45919
UniProtKB: P38238
NCBI: NP_009617
Additional Links:
LinkOut:
  • SGD - Saccharomyces Genome Database
  • YGOB - Yeast Gene Order Browser
  • yMGV - yeast Microarray Global Viewer

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