GSFLogo GSF

 

 mipsLogo mips
GenRE

Navigation: » Corum » Intro

Complex Set info

Core Set
all Complexes

General Search info




Enter a protein complex name, protein complex ID, gene name, protein name, MfunGD-ID, PMID, UniProt-ID, Functional Annotation, Comments etc.

Specific Search info













Browse
functional annotation
About CORUM
mips home mail to webmaster

Readme (download)

Data from CORUM are available in tab-delimited format as well as in PSI-MI 2.5 format (XML).

Download of CORUM data in tab-delimited format

Data are presented in the following order:
  1. CORUM protein complex ID
  2. Protein complex name
  3. Protein complex synonyms, separated by semicolons.
  4. Organism from which the protein complex was isolated.
  5. SwissProt primary accessions of the protein complex subunits. If subunits can not be identified unam biguously, the respective groups of SwissProt entries are presented within brackets. An example is complex 1001.
  6. Protein complex purification method according to the PSI-MI annotation scheme available at http://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=MI or http://www.ebi.ac.uk/ontology-lookup/ .
  7. PubMed ( http://www.ncbi.nlm.nih.gov/sites/entrez?db=PubMed ) identifier of the article where the characterization of the protein complex has been described.
  8. Functional annotation of the protein complex according to the FunCat categories ( http://mips.gsf.de/proj/funcatDB/search_main_frame_update.html ), comma separated.
  9. Comments that provide additional information about the protein complex like disease relevance or cellular function.

Protein complexes which were found by one of the search options can also be downloaded in tab-delimited format.


Download of CORUM data in PSI-MI format

In order to define community standards for data representation in proteomics to facilitate data comparison, exchange and verification the PSI-MI standard was introduced . Information about PSI-MI is available at http://www.psidev.info/ . The complete CORUM dataset as well as user-defined subsets are available for download in the PSI-MI 2.5 format. Since the PSI-MI format does not allow more than one variant per protein; in case one variant is randomly picked.

© 2003 GSF - Forschungszentrum für Umwelt und Gesundheit, GmbH Ingolstädter Landstraße 1, D-85764 Neuherberg

Imprint

Disclaimer:
MIPS Databases and associated information are protected by copyright. This server and its associated data and services are for academic, non-commercial use only. The GSF has no liability for the use of results, data or information which have been provided through this server. Neither the use for commercial purposes, nor the redistribution of MIPS database files to third parties nor the distribution of parts of files or derivative products to any third parties is permitted. Commercial users may contact the distributor Biomax Informatics AG.